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EMAGE:7450

Slc17a1 solute carrier family 17 (sodium phosphate), member 1 ( MGI:103209)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7450
euxassay_004444_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7450Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7450_wholemount_moderate.wlz
7450_wholemount_weak.wlz
7450_wholemount_possible.wlz
7450_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7450_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7568
Entity Detected:Slc17a1, solute carrier family 17 (sodium phosphate), member 1 ( MGI:103209)
Sequence:sense strand is shown

>T7568
GGCCGTTCTGTCTTAATCAGGTCGGTGTGACTCTTATTGTGTGCCAAATGAAATGAAAGTCTAATTCTCC
AGAGGGCTTTTGGGGTCCTTCCCTGGTAGAGAATTTCCCAAGTGGATGGAGACCAAGCCCAGCAACAAGA
AGATAAATCTCAAATGGAGAACCAGTGCCTCCCCAAGAAAGTTCCAGGGTTCTGTTCCTTCCGGTATGGA
CTGGCTATCCTTCTGCACTTCTGTAACATTGCCATCATGGCCCAGAGAGTGTGCCTGAACCTCACCATGG
TAGCCATGGTGAACAACACAGGGTCACCCCATTTATTTAACGAATCTGTAGTGGAGATGTTGGACAATGT
AAAGAACCCTGTGTATTCCTGGAGTCCTGATATCCAAGGGCTTATTCTCAGTTCTGTCTTCTTTGGTATG
GTCGTGGTTCAGGCTCCTGTCGGGTACCTATCTGGAATATACCCAATGAAGAGAATAATTGGGTCTTCAC
TGTTCCTCAGCTCTTTGATGTCCTTGCTCATCCCACCTGCTGCACAAGTCGGAGCTGCTTTAGTCATTGT
GTGTCGAGTACTCCAGGGAATAGCCCAGGGAACAGTGTCAACAGGCCAGCATGAAATATGGGTCAAATGG
GCACCTCCCTTAGAACGAGGCAGACTTACCTCTATGACTCTATCAGGGTTTGTAATGGGACCATTTATTG
TCCTGCTTGTGAGTGGCTTCATCTGTGATCTTCTGGGCTGGCCCATGGTCTTCTACATCTTTGGTATTGT
TGGGTGTGTTCTGAGTCTTTCCTGGTTCTTTCTATTCTTTGATGACCCCAAGGACCACCCGTATATGAGC
AGCAGTGAGAAGGACTACATCATATCCTCCCTCATGCAACAGGCCAGCTCAGGCAGACAATCCCTGCCAA
TCAAAGCTATGCTTAAATCTCTTCCACTCTGGGCCATTATCCTCAATAGCTTTGCTTTCATATGGTCGAA
CAGTCTCCTGGTTACATACACGCCGACATTTATCAGCACTGTGCTTCATGTTAATGTTAGAGAGAATGGA
CTGCTGTCCAGCCTCCCCTATCTGCTTGCCTACATCTGTGGTATCCTAGCAGGTCAGATGTCAGACTTCT
TCCTGACCAGGAAGATTTTCAGCATAGTTACCGTCCGGAAACTCTTCACCACACTAGGGAGTTTCTGTCC
CGTGATCTTCATCATGTGCTTGCTCTACCTGAGCTACAACTTCTACAGCACCGTCATTTTCCTGACACTT
GCCAACTCAACACTTAGCTTTTCCTACTGCGGACAACTTATCAATGCCTTGGATATTGCTCCCAGATATT
ATGGATTTCTTAAGGCAGTCACAGCTTTAATTGGAATGTTTGGGGGCCTGATTTCTTCAACTCTTGCTGG
GTTGATTCTTAATCAGGATCCGGAATATGCTTGGCATAAAATTTTCTTCTTGATGGCAGGCATTAATGTG
ACATGCCTGGTTTTCTATTTTCTATTTGCTAAAGGAGAAATTCAGGACTGGGCTAAAGAAATAAAAACCA
CACGACTGTGAAGGGAAGACATGTGAAAATGGCATTGATAACCTTTCACTGGACAAGAAAGACAACTTGA
GAAAAATCTTCTAGCCTAGACTAATGTCTCTGAAGTGTTGGACTCTTCAGTGACATCTCTCTGTGTTTTG
TTTCCTTTTTCTACAAAAGTTAGTAGAAAAAGGAGAAGCTGAGAAGCCTGAGGTCAGCATCCTTATAGAA
AGAAAGAGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGGTAGCATGAGG
CTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGTATTGTATGTAACAAG
TTATACTTCTGACTTTAAAGGAGGATTTATTTATGTCTTCCTCTATGATCTAATAAACAAACATAAGACA
AAATTTTACTCTACAACTTCAGGAAAAGTAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4241557 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4241557 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7453 same embryo
 EMAGE:7451 same embryo
 EMAGE:7449 same embryo
 EMAGE:7452 same embryo
 EMAGE:7448 same embryo
 EurExpress:euxassay_004444 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS