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EMAGE:7868

Abcc10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 ( MGI:2386976)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7868 EMAGE:7868 EMAGE:7868 EMAGE:7868 EMAGE:7868
"Pseudo-wholemount" of euxassay_010113. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_010113_01 euxassay_010113_02 euxassay_010113_03 euxassay_010113_04
EMAGE:7868 EMAGE:7868 EMAGE:7868 EMAGE:7868 EMAGE:7868
euxassay_010113_05 euxassay_010113_06 euxassay_010113_07 euxassay_010113_08 euxassay_010113_09
EMAGE:7868 EMAGE:7868 EMAGE:7868 EMAGE:7868 EMAGE:7868
euxassay_010113_10 euxassay_010113_11 euxassay_010113_12 euxassay_010113_13 euxassay_010113_14
EMAGE:7868 EMAGE:7868 EMAGE:7868 EMAGE:7868 EMAGE:7868
euxassay_010113_15 euxassay_010113_16 euxassay_010113_17 euxassay_010113_18 euxassay_010113_19
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euxassay_010113_20 euxassay_010113_21 euxassay_010113_22 euxassay_010113_23 euxassay_010113_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7868Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7868_wholemount_strong.wlz
7868_wholemount_moderate.wlz
7868_wholemount_weak.wlz
7868_wholemount_possible.wlz
7868_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7868_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T38169
Entity Detected:Abcc10, ATP-binding cassette, sub-family C (CFTR/MRP), member 10 ( MGI:2386976)
Sequence:sense strand is shown

>T38169
CCTGGTACTAACTCTGCTGTGGCATTGCCAGCGAGGTACATTTCTGCCCCCACTTCTCCCAGGACCTCTG
GGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTTGGCCTATGGGTTGGGCTGGGCAGCCCCTG
GGGGACCACAAGAGCCCTGGACTCATGATCCCTTCCTGTCCTCTGAGAGTCAAGAAACAGAGGTAGCTGA
AGATGGAGAGAGTTGGCTGTCACGCTTTTCCTATGCCTGGTTGGCACCCTTGCTTGCTCGTGGAGTCCGA
GGAGAGCTCCAGCAGCCCCGGGACACTTGCCGCCTCCCCCGCAGGCTGCATCCTGCCTTCCTGGCCCGAG
TTTTCCAAGCACATTGGAAGGAGGGGGCCCAACTGTGGAGGGCCCTGTACAGGGCCTTTGGATGTTGCTA
CCTGGCCCTTGGACTGTTGAAGATGGTGGGGACCATGCTGGGATTCTCCGGGCCTCTGCTGCTCTCCCTC
CTGGTGGGCTTCCTGGAGGAAGGTCAAGAGCCTCTAAGCCACGGCCTGCTCTATGTCCTGGGGTTGGCTG
GTGGGACTGTGATAAGTGCTGTGCTGCAGAATCAGTATGGGTATGAGGTCCGTAAAGTGACACTTCAGGC
ACGAGTGGCTGTGCTGAGCACCCTCTACCGCAAAGCCCTGAAGCTTGGGCCCAGCCGCCCTCCCACCGGG
GAGGTCCTGAACCTACTAGGCACCGACTCCGAGAGGCTGCTCAACTTTGCTGGCAGCTTC
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from wild type C57BL/6J mouse whole brain cDNA), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 104267. Forward Primer - name:104267_F_cDNA_Abcc10, sequence:CCTGGTACTAACTCTGCTGTGG; Reverse Primer - name:104267_N_SP6_cDNA_Abcc10, sequence:GAAGCTGCCAGCAAAGTTGAG. The reverse primer contains a 5' extension containing an Sp6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using Sp6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_010113 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS