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EMAGE:79

Hoxb1 homeobox B1 ( MGI:96182)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:79
Figure 5.F, Studer et al., 1998 [PMID:9463349] . Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd. who owns the copyright

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:79Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
79_wholemount_strong_3D_1.wlz
79_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:79_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
rhombomere 04
strong strong
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1202168
Entity Detected:Hoxb1, homeobox B1 ( MGI:96182)
Notes:Probe used in this study by Studer et al., 1998 [PMID:9463349] is indicated as being described by Wilkinson et al., 1989 [PMID:2571936] ie. an "800bp EcoRI fragment of Hox-2.9".
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Studer et al., 1998 [PMID:9463349] . Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:9463349] Studer M, Gavalas A, Marshall H, Ariza-McNaughton L, Rijli FM, Chambon P, Krumlauf R 1998 Genetic interactions between Hoxa1 and Hoxb1 reveal new roles in regulation of early hindbrain patterning. Development (125):1025-36
 [ doi:10.1038/341405a0] [ PMID:2571936] Wilkinson DG, Bhatt S, Cook M, Boncinelli E, Krumlauf R 1989 Segmental expression of Hox-2 homoeobox-containing genes in the developing mouse hindbrain. Nature (341):405-9
Links:MGI:1315186 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI