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EMAGE:801

Otx1 orthodenticle homolog 1 (Drosophila) ( MGI:97450)
TS19 (11.5 dpc)
in situ hybridisation

Data Images
EMAGE:801
Fig 2M Suda et al, 2001 [PMID:11493561] . Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Image annotation: zl - zona limitans
Expression Pattern Description
Spatial Annotation:
EMAGE:801EMAGE:801Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mapping3D context movie

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
801_voxel_strong_3D_1.wlz
801_voxel_possible_3D_1.wlz
801_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:801_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
telencephalon
detected detected
diencephalon
detected detected
midbrain
detected detected
regionalMost intense expression in anterior pretectum, tegmentum and boundary region along the zona limitans region
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1328383
Entity Detected:Otx1, orthodenticle homolog 1 (Drosophila) ( MGI:97450)
Notes:The Otx1 probe used in this study by Suda et al, 2001 [PMID:11493561] is described as that used by Matsuo et al, 1995 [PMID:7590242] . Matsuo do not describe any Otx1 probes, only an Otx2 probe.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:11.5 dpc
Theiler Stage:TS19
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Suda et al, 2001 [PMID:11493561] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:11493561] Suda Y, Hossain ZM, Kobayashi C, Hatano O, Yoshida M, Matsuo I, Aizawa S 2001 Emx2 directs the development of diencephalon in cooperation with Otx2. Development (128):2433-50
 [ doi:10.1101/gad.9.21.2646] [ PMID:7590242] Matsuo I, Kuratani S, Kimura C, Takeda N, Aizawa S 1995 Mouse Otx2 functions in the formation and patterning of rostral head. Genes Dev (9):2646-58
Links:MGI:2148278 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI