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EMAGE:8140

Abhd12 abhydrolase domain containing 12 ( MGI:1923442)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:8140 EMAGE:8140 EMAGE:8140 EMAGE:8140 EMAGE:8140
"Pseudo-wholemount" of euxassay_016421. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_016421_01 euxassay_016421_02 euxassay_016421_03 euxassay_016421_04
EMAGE:8140 EMAGE:8140 EMAGE:8140 EMAGE:8140 EMAGE:8140
euxassay_016421_05 euxassay_016421_06 euxassay_016421_07 euxassay_016421_08 euxassay_016421_09
EMAGE:8140 EMAGE:8140 EMAGE:8140 EMAGE:8140 EMAGE:8140
euxassay_016421_10 euxassay_016421_11 euxassay_016421_12 euxassay_016421_13 euxassay_016421_14
EMAGE:8140 EMAGE:8140 EMAGE:8140 EMAGE:8140 EMAGE:8140
euxassay_016421_15 euxassay_016421_16 euxassay_016421_17 euxassay_016421_18 euxassay_016421_19
EMAGE:8140
euxassay_016421_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:8140Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
8140_wholemount_strong.wlz
8140_wholemount_moderate.wlz
8140_wholemount_weak.wlz
8140_wholemount_possible.wlz
8140_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:8140_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T63061
Entity Detected:Abhd12, abhydrolase domain containing 12 ( MGI:1923442)
Sequence:sense strand is shown

>T63061
TGTGGTAAAGCATCATCCTGACAGGTGCTGAGTTCCCTTGGCTACCACGTGGTCACCTTTGACTACAGAG
GTTGGGGTGACTCAGTAGGAACACCATCGGAGCGAGGCATGACGTATGACGCACTCCATGTTTTTGACTG
GATCAAAGCAAGAAGTGGTGATAATCCTGTGTATATTTGGGGCCATTCACTGGGCACCGGAGTGGCAACA
AATCTGGTACGGCGCCTCTGTGAGCGAGAGACGCCACCAGATGCCCTTATATTGGAGTCTCCATTCACAA
ATATTCGTGAAGAAGCAAAGAGTCATCCATTTTCAGTGATATACCGATACTTCCCTGGCTTTGACTGGTT
CTTCCTCGACCCCATTACAAGCAGTGGAATTAAATTTGCAAATGACGAAAATATGAAGCACATCTCCTGC
CCTCTGCTCATCTTGCATGCCGAGGATGATCCAGTTGTGCCCTTTCATCTCGGTAGAAAGCTATACAACA
TTGCTGCGCCATCTCGAAGTTTCCGAGACTTCAAAGTCCAGTTTATCCCCTTTCACTCAGACCTTGGCTA
CAGACATAAATACATCTACAAGAGCCCAGAGCTTCCAAGGATACTGAGGGAATTCCTAGGGAAGTCGGAA
CCGGAACGCCAGCACTGAGACCGGCCCATGAAGGAGCATGAAGACCCACCTTCCTTCCTTCTCCCCTGGA
CAGCAGTCTGGCACCCAGAAGCCCAGAGTGCCACCACCTGTGGTGCTCAGGAGCCCAGTGCACACCTAGA
AAGAGGACTCAGACACAGCGGGCAGAGGCTCCTGATGGATCTGTGAGGAAAACCCGGTGGCAGGCAGGTG
GCCCCCCCAGCCCTCTGGTGACCACTGTATCTGAGCTCTTTTTGGGAAG
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from wild type C57BL/6J mouse whole brain cDNA), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 142270. Forward Primer - name:142270_F_cDNA_6330583M11Rik, sequence:TGTGGTAAAGCATCATCCTGAC; Reverse Primer - name:142270_N_SP6_cDNA_6330583M11Rik, sequence:CTTCCCAAAAAGAGCTCAGATAC. The reverse primer contains a 5' extension containing an Sp6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using Sp6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:8142 same embryo
 EMAGE:8141 same embryo
 EMAGE:8143 same embryo
 EMAGE:8139 same embryo
 EurExpress:euxassay_016421 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS