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EMAGE:816

Hoxd4 homeobox D4 ( MGI:96208)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:816
Figure 5A of Bel et al., 1998 [PMID:9716520] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Abbreviations used: OV, otic vesicle; s, somite; r, rhombomere.
Expression Pattern Description
Spatial Annotation:
EMAGE:816Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
816_wholemount_strong_3D_1.wlz
816_wholemount_moderate_3D_1.wlz
816_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:816_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
trunk paraxial mesenchyme
detected detected
regionalThe anterior limits of expression in the mesoderm is at the s5/6 junction and in the neural tube at the r6/7 hindbrain boundary.
neural tube
detected detected
regionalThe anterior limits of expression in the mesoderm is at the s5/6 junction and in the neural tube at the r6/7 hindbrain boundary.
rhombomere 08
detected detected
The anterior limits of expression in the mesoderm is at the s5/6 junction and in the neural tube at the r6/7 hindbrain boundary.
rhombomere 07
detected detected
The anterior limits of expression in the mesoderm is at the s5/6 junction and in the neural tube at the r6/7 hindbrain boundary.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1331655
Entity Detected:Hoxd4, homeobox D4 ( MGI:96208)
Notes:The probe used in this study by Bel et al., 1998 [PMID:9716520] was "the full cDNA from D. Duboule". Exact length/probe end points unspecified.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Bel et al., 1998 [PMID:9716520] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:9716520] Bel S, Core N, Djabali M, Kieboom K, Van der Lugt N, Alkema MJ, Van Lohuizen M 1998 Genetic interactions and dosage effects of Polycomb group genes in mice. Development (1998):3543-51
Links:MGI:1331671 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI