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EMAGE:868

Irx3 Iroquois related homeobox 3 (Drosophila) ( MGI:1197522)
TS12 (8.5 dpc)
in situ hybridisation

Data Images
EMAGE:868
Fig 8K Mahlapuu et al, 2001 [PMID:11124112] . Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd who owns the copyright.

Expression pattern clarity: two stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Image annotations: co, coelomic cavity; so, somatic mesoderm; sp, splanchnic mesoderm.
Expression Pattern Description
Spatial Annotation:
EMAGE:868EMAGE:868Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mapping3D context movie

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
868_voxel_strong_3D_1.wlz
868_voxel_moderate_3D_1.wlz
868_voxel_weak_3D_1.wlz
868_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:868_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
somatopleure
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:659439
Entity Detected:Irx3, Iroquois related homeobox 3 (Drosophila) ( MGI:1197522)
Sequence:sense strand is shown

>MGI:659439
ATAGTCAAAAGTGGCAACAGCTCATTTATTTAGCCAAAAAATAGATACTTTCTTGTACAATTTGGTTCAC
ACGTATGTACATTTTCCCGTATATACAAAAAGAGTCAGACAGGCTTGTTCTCTCCGTAACCCCACTCCCC
CCCGCCGAAATCAACACAACGAAGGAACCTCACAATCTAAATGTGGGGTGACTTGGGGGAGGGCCAAGGG
GGGGGGACTGGCTTTCTTTCTTTCTTTCGTCCTTTCCTGTTGTTGTTGTTGTTGTTGTTTAGTGTTTCTT
TTAAGGTAATCATACACAGACATGCTTGCAACTCGTCACTATACAGAGCGATTTTGTTTTGTTTTGTTTT
TTACAATTAGTACAACGATTTAAAAATGGTTGAAAAGTTAAGACGAGGAGAGAGCTGATAAGACCAGAGC
AGCGTCCAGGTGGTTCTGTGGCCGCCTTGCACCGGCTGGAAAGCTGTCTTGAGTAACTTTTTCTCCACTT
CCAAGGCACTACAGCGATCTGTTCCACTCTCCGGCTCGGCAG
Notes:The probe used in this study by Mahlapuu et al, 2001 [PMID:11124112] is described as being transcribed from IMAGE cDNA clone 1245751. GenBank sequence AA798846 is the 5' EST read from this clone.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:either (129P2/OlaHsd x C57BL/6) or (129P2/OlaHsd x CD-1) or (129X1/SvJ x C57BL/6)
Age:8.5 dpc
Theiler Stage:TS12
Mutations:none (wild-type)
Preparation:section
Procedures
Embedding:cryosection
General Information
Authors:Mahlapuu et al, 2001 [PMID:11124112] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:11124112] Mahlapuu M, Ormestad M, Enerback S, Carlsson P 2001 The forkhead transcription factor Foxf1 is required for differentiation of extra-embryonic and lateral plate mesoderm. Development (128):155-66
Links:MGI:1929441 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI