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EMAGE:870

Crabp1 cellular retinoic acid binding protein I ( MGI:88490)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:870
Figure 5E of Niederreither et al., 2000 [PMID:10654602] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Abbreviations used: b1-b3, branchial arches or prospective branchial arch neural crest cells; fn, frontonasal mesenchyme; mb, midbrain.
Expression Pattern Description
Spatial Annotation:
EMAGE:870Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
870_wholemount_strong_3D_1.wlz
870_wholemount_moderate_3D_1.wlz
870_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:870_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
2nd branchial arch mesenchyme derived from neural crest
strong strong
3rd branchial arch mesenchyme derived from neural crest
strong strong
head mesenchyme derived from neural crest
strong strong
regionalExpression is in the cells accumulating in branchial arch 4. Expression is in the frontonasla region in cells derived from the forebrain and midbrain.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1349603
Entity Detected:Crabp1, cellular retinoic acid binding protein I ( MGI:88490)
Notes:The probe used in this study by Niederreither et al., 2000 [PMID:10654602] was produced in the authors' laboratory and is of undefined sequence.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Niederreither et al., 2000 [PMID:10654602] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:10654602] Niederreither K, Vermot J, Schuhbaur B, Chambon P, Dolle P 2000 Retinoic acid synthesis and hindbrain patterning in the mouse embryo. Development (127):75-85
Links:MGI:1350669 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI