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EMAGE:9048

Mc4r melanocortin 4 receptor ( MGI:99457)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9048 EMAGE:9048 EMAGE:9048 EMAGE:9048 EMAGE:9048
"Pseudo-wholemount" of euxassay_017910. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_017910_01 euxassay_017910_02 euxassay_017910_03 euxassay_017910_04
EMAGE:9048 EMAGE:9048 EMAGE:9048 EMAGE:9048 EMAGE:9048
euxassay_017910_05 euxassay_017910_06 euxassay_017910_07 euxassay_017910_08 euxassay_017910_09
EMAGE:9048 EMAGE:9048 EMAGE:9048 EMAGE:9048 EMAGE:9048
euxassay_017910_10 euxassay_017910_11 euxassay_017910_12 euxassay_017910_13 euxassay_017910_14
EMAGE:9048 EMAGE:9048 EMAGE:9048 EMAGE:9048 EMAGE:9048
euxassay_017910_15 euxassay_017910_16 euxassay_017910_17 euxassay_017910_18 euxassay_017910_19
EMAGE:9048
euxassay_017910_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9048Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9048_wholemount_strong.wlz
9048_wholemount_moderate.wlz
9048_wholemount_weak.wlz
9048_wholemount_possible.wlz
9048_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9048_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50649
Entity Detected:Mc4r, melanocortin 4 receptor ( MGI:99457)
Sequence:sense strand is shown

>T50649
CTTGCCCTCAGAATCCATACTGCGTGTGCTTCATGTCTCATTTTAATTTGTATCTCATACTGATCATGTG
TAACGCCGTCATCGACCCTCTCATTTATGCCCTCCGGAGTCAAGAACTGAGGAAAACTTTCAAAGAGATC
ATCTGTTTCTATCCCCTGGGAGGCATCTGTGAGTTGTCTAGCAGGTATTAAGTGGGGGACAGAGTGCAAA
CTAGGTAGATACCTGCAGACTTTGTCACTCTGGCCCGATCTGAGCAGTGTACTTCCCAACAGCTGCCTCT
TCTGTGTAATGCTTTGGTTGAAAATATCTACTGTATAAATGTAAGTTTGTGACTTTTGACATGGAAAAAA
AATCTCAACGTGTTATGTTTATTGACACGCTATATTTTTTTGTTTGTAAAATGCTTATTTATGTTCTATA
TAGTGTGGGCGTTATGAATTGACATGAAAGAAAAACAGACACCCTTATTAAAACTTTGACAGTGTTTCTT
TCCTGTTATTTATCAAGGTTCCACACTTGTTCTTTCTGTAGTGGCCGAAATCAGAACCTTATTAAATGTG
TTCTCAGCTGTTCTCATGTATTAGCCCCACAGTACTGCAGAGGCACTGACCCCACTGTTTATGGGGAAAT
ATTTAAACACTACATGCTTGATCATTAAAATGAGTCAGCTCTCTTAGTGAAATTTCGAGCAATAGAATAA
AAGCTTGCCTATTATCCTTGCTGTCCAAATACACTGATGCTTCTTTTTAAGTAAAGGAAAGAGAAAGGGG
GAAGAAGCAGCTACTGAGGAGAAAGTGAGATTTCTGTCACATGCATTTCTCCAAGAAGGAATGGTTCATT
GCCCGAGACTCAGAGTTCACACAGGCAAGTCAGCTGTGGTAGGGGAAATGCCCACTTAATAGATTAAAGA
TATTATAATAGATAATAATAGATAAAATAGATTAATAGATAAAATAGATACCAATCTTAATAGATTAAAG
TGTCCTGTTAAATATAAACTGTCCACGCCATGCTGAAATTTCCTATGCCAAATGATACCCCACCATAACA
GAATGATTTCTTTCTGGCTTCTTACCAGGGATCTGGTT
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:CTTGCCCTCAGAATCCATACTGCG; Reverse Primer - name:unspecified, sequence:AACCAGATCCCTGGTAAGAAGCC. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_017910 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS