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EMAGE:9060

Neurog2 neurogenin 2 ( MGI:109619)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9060 EMAGE:9060 EMAGE:9060 EMAGE:9060 EMAGE:9060
"Pseudo-wholemount" of euxassay_017863. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_017863_01 euxassay_017863_02 euxassay_017863_03 euxassay_017863_04
EMAGE:9060 EMAGE:9060 EMAGE:9060 EMAGE:9060 EMAGE:9060
euxassay_017863_05 euxassay_017863_06 euxassay_017863_07 euxassay_017863_08 euxassay_017863_09
EMAGE:9060 EMAGE:9060 EMAGE:9060 EMAGE:9060 EMAGE:9060
euxassay_017863_10 euxassay_017863_11 euxassay_017863_12 euxassay_017863_13 euxassay_017863_14
EMAGE:9060 EMAGE:9060 EMAGE:9060 EMAGE:9060 EMAGE:9060
euxassay_017863_15 euxassay_017863_16 euxassay_017863_17 euxassay_017863_18 euxassay_017863_19
EMAGE:9060
euxassay_017863_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9060Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9060_wholemount_strong.wlz
9060_wholemount_moderate.wlz
9060_wholemount_weak.wlz
9060_wholemount_possible.wlz
9060_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9060_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50725
Entity Detected:Neurog2, neurogenin 2 ( MGI:109619)
Sequence:sense strand is shown

>T50725
TGATGCACGAGTGCAAGCGTCGCCCGTCGCGCTCACGGGCCGTCTCCCGAGGTGCCAAGACGGCGGAGAC
GGTGCAGCGCATCAAGAAGACCCGCAGGCTCAAGGCCAACAACCGCGAGCGCAACCGCATGCACAACCTA
AACGCCGCGCTGGACGCGCTGCGCGAGGTGCTGCCCACCTTCCCCGAGGATGCCAAGCTCACGAAGATCG
AGACGCTGCGCTTCGCCCACAATTACATCTGGGCGCTCACCGAGACTCTGCGCCTGGCGGACCACTGCGC
CGGCGCCGGTGGCCTCCAGGGGGCGCTCTTCACGGAGGCGGTGCTCCTGAGCCCGGGAGCTGCGCTCGGC
GCCAGCGGGGACAGCCCTTCTCCACCTTCCTCCTGGAGCTGCACCAACAGCCCGGCGTCATCCTCCAACT
CCACGTCCCCATACAGCTGCACTTTATCGCCCGCTAGCCCCGGGTCAGACGTGGACTACTGGCAGCCCCC
ACCTCCGGAGAAGCATCGTTATGCGCCTCACCTGCCCCTCGCCAGGGACTGTATCTAGAGCTGCGGGTCT
CCCTCTCTCGTCCTCTACCCGGCCCTCTTCCCATCCTTCTCCCGCCCCTCACCCTCCACGCCCCGGACTC
CACTTCACAGAGCAGAGGTGGCCCTTGCAATCCCCTCGGCGGCTGGTGCATTCGGGGGTGGAGACCAGCT
CTGGTTTATTGAAGATGTGAGGATTTATGGTCAAAGAGGACTATGGCGTGTGGGAGTGGGGGCTGGCGTG
GGGAACCTCGTAAGACTGTAAAAGACACTGAGAAAAAGTACCATAACTAACGAGTGTGCAGAGCAGACTG
ACGCTCCTCCCCTCTCTCAGAGCTGCTGGAGGAGAACTCCGGGCAGGCAGTTCGTGTGAATCTCTCAGAG
GGAATGCAACTGGTCCCTGTGATCTTTTCACCTTCGTTTCTACATAGAGATGTTAATGTCAGTCGAAAGA
AATGTATTTTAGCATCTGAATGAATTTACTGGTAATAATATTATCCACACATTTGCAATGGCTGGCATCT
GCTCTATTCCCATTGCTGTCTGCAGGCTGT
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:TGATGCACGAGTGCAAGCGTCG; Reverse Primer - name:unspecified, sequence:ACAGCCTGCAGACAGCAATGGG. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:9063 same embryo
 EMAGE:9062 same embryo
 EMAGE:9059 same embryo
 EMAGE:9061 same embryo
 EMAGE:9058 same embryo
 EurExpress:euxassay_017863 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS