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EMAGE:9070

Pfkl phosphofructokinase, liver, B-type ( MGI:97547)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9070 EMAGE:9070 EMAGE:9070 EMAGE:9070 EMAGE:9070
"Pseudo-wholemount" of euxassay_017900. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_017900_01 euxassay_017900_02 euxassay_017900_03 euxassay_017900_04
EMAGE:9070 EMAGE:9070 EMAGE:9070 EMAGE:9070 EMAGE:9070
euxassay_017900_05 euxassay_017900_06 euxassay_017900_07 euxassay_017900_08 euxassay_017900_09
EMAGE:9070 EMAGE:9070 EMAGE:9070 EMAGE:9070 EMAGE:9070
euxassay_017900_10 euxassay_017900_11 euxassay_017900_12 euxassay_017900_13 euxassay_017900_14
EMAGE:9070 EMAGE:9070 EMAGE:9070 EMAGE:9070 EMAGE:9070
euxassay_017900_15 euxassay_017900_16 euxassay_017900_17 euxassay_017900_18 euxassay_017900_19
EMAGE:9070
euxassay_017900_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9070Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9070_wholemount_strong.wlz
9070_wholemount_moderate.wlz
9070_wholemount_weak.wlz
9070_wholemount_possible.wlz
9070_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9070_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50803
Entity Detected:Pfkl, phosphofructokinase, liver, B-type ( MGI:97547)
Sequence:sense strand is shown

>T50803
GCGGCGGGAGAGGAGCTTGGGCTCCTGGTCTCCGCTGCCGCCATGGCTACCGTGGACCTGGAGAAACTGC
GGATGTCGGGGGCTGGCAAGGCCATTGGAGTGCTGACCAGCGGCGGTGATGCGCAAGGTATGAATGCTGC
TGTCAGGGCTGTGACCCGTATGGGCATATATGTGGGGGCCAAAGTCTTCCTCATCTATGAGGGCTACGAG
GGCCTTGTGGAAGGAGGCGAGAACATCAAGCCAGCCAACTGGCTCAGCGTTTCCAATATCATCCAGCTGG
GTGGCACCATTATTGGCAGTGCCCGCTGTAAGGCCTTCACTACGAGGGAAGGCCGCCTGGCTGCAGCCTA
CAATCTGCTCCAACACGGCATCACCAACCTGTGTGTCATCGGTGGCGACGGCAGCCTCACGGGGGCCAAC
ATCTTCCGCAACGAGTGGGGCAGCTTGCTGGAGGAGCTGGTGAAGGAAGGCAAGATCTCAGAGTCCACAG
CTCAGAACTACGCACACTTGACCATCGCCGGTCTGGTGGGCTCCATCGATAACGACTTCTGTGGCACTGA
CATGACCATTGGCACAGACTCAGCCCTGCACCGCATTATGGAGGTCATTGACGCCATCACTACCACTGCC
CAAAGTCACCAGAGGACCTTTGTTTTGGAGGTGATGGGACGGCACTGCGGGTACCTGGCGCTGGTGTCTG
CCCTGGCTTCCGGGGCTGATTGGCTATTCATTCCTGAAGCGCCCCCTGAGGATGGCTGGGAGAACTTCAT
GTGTGAGAGGCTGGGCGAGACTCGGAGCCGAGGCTCTCGGCTGAACATCATCATCATCGCAGAGGGTGCC
ATTGACCGGCATGGAAAGCCTATCTCATCCAGCTACGTGAAGGATCTGGTGGTTCAGAGGCTGGGCTTCG
ATACACGAGTGACTGTGCTGGGTCATGTACAGCGAGGAGGGACGCCTTCAGCCTTCGACCGAATCCTGAG
TAGCAAGATGGGTATGGAGGCCGTGATGGCGCTGCTAGAGGCCACGCCTGACACGCCGGCCTGTGTGGTC
AGCCTCTCCGGGAACCAGTCTGTGAGGCTGCCTCTCATGGAGTGTGTGCAAGTGACAAAGGACGTGCAGA
AGGCCATGGACGAGGAGAGGTTTGACGAGGCCATCCAGCTCCGTGGCAGGAGCTTTGAGAACAACTGGAA
AATTTACAAGCTCCTTGCCCACCAGAAGGTGTCTAAAGAGAAGTCCAACTTCTCCCTGGCCATCCTGAAT
GTGGGGGCTCCAGCTGCTGGCATGAATGCAGCTGTGCCGTCCGCAGTGCGCACTGGTATCTCCGAGGGAC
ACACGGTATACATCGTGCATGATGGCTTTGAGGGTCTGGCCAAGGGTCAGGTGCAAGAAGTGGGCTGGCA
TGATGTGGCAGGCTGGCTGGGACGTGGTGGCTCGATGCTGGGGACCAAGAGGACACTGCCCAAGCCCCAC
CTGGAGGCCATTGTGGAGAATCTCCGCACCTACAACATCCACGCCCTGCTGGTGATTGGTGGCTTTGAGG
CCTACGAGGGTGTGCTGCAGCTGGTGGAGGCCCGGGGGCGCTACGAGGAACTCTGCATTGTCATGTGTGT
CATCCCAGCCACCATCAGCAACAATGTGCCTGGCACTGACTTCAGCCTGGGCTCAGACACGGCTGTCAAC
GCTGCAATGGAGAGTTGTGATCGCATCAAGCAGTCAGCCTCAGGGACAAAGCGGCGTGTGTTCATTGTAG
AGACCATGGGGGGCTACTGTGGCTACCTGGCTACTGTGACCGGCATTGCTGTGGGTGCCGATGCTGCCTA
CGTCTTTGAGGACCCTTTCAACATCCATGACTTAAAGGCCAATGTGGAGCATATGACAGAGAAGATGAAG
ACAGACATCCAGAGGGGACTGGTGCTCCGGAACGAGAAGTGTCACGAACACTACACCACAGAGTTCCTAT
ACAACCTGTACTCCTCAGAAGGCAGGGGCGTGTTTGACTG
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:unspecified; Reverse Primer - name:unspecified, sequence:unspecified. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:9069 same embryo
 EMAGE:9068 same embryo
 EurExpress:euxassay_017900 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS