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EMAGE:9135

Ass1 argininosuccinate synthetase 1 ( MGI:88090)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9135 EMAGE:9135 EMAGE:9135 EMAGE:9135 EMAGE:9135
"Pseudo-wholemount" of euxassay_018659. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_018659_01 euxassay_018659_02 euxassay_018659_03 euxassay_018659_04
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euxassay_018659_10 euxassay_018659_11 euxassay_018659_12 euxassay_018659_13 euxassay_018659_14
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euxassay_018659_15 euxassay_018659_16 euxassay_018659_17 euxassay_018659_18 euxassay_018659_19
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euxassay_018659_20 euxassay_018659_21 euxassay_018659_22 euxassay_018659_23 euxassay_018659_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9135Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9135_wholemount_strong.wlz
9135_wholemount_moderate.wlz
9135_wholemount_weak.wlz
9135_wholemount_possible.wlz
9135_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9135_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50117
Entity Detected:Ass1, argininosuccinate synthetase 1 ( MGI:88090)
Sequence:sense strand is shown

>T50117
TTCTGGCCTACAGTGGTGGCCTGGACACCTCCTGCATCCTCGTGTGGCTGAAGGAACAAGGCTATGATGT
CATCGCCTACCTGGCCAACATTGGCCAGAAGGAAGACTTTGAGGAAGCCAGGAAGAAGGCGCTGAAGCTT
GGGGCCAAAAAGGTGTTCATTGAGGATGTGAGCAAGGAATTTGTGGAAGAGTTCATCTGGCCTGCTGTCC
AGTCCAGTGCACTCTACGAGGACCGCTATCTCCTGGGCACCTCTCTCGCCAGGCCTTGCATAGCTCGCAG
ACAGGTGGAGATTGCCCAGCGTGAAGGGGCCAAGTATGTGTCTCACGGCGCCACGGGAAAGGGGAATGAC
CAGGTCCGCTTTGAGCTCACCTGCTACTCACTGGCACCCCAGATTAAGGTCATCGCTCCCTGGAGGATGC
CTGAGTTTTACAACCGGTTCAAGGGCCGAAATGATCTGATGGAGTATGCAAAGCAACACGGAATCCCCAT
CCCTGTCACCCCCAAGAGCCCCTGGAGTATGGATGAAAACCTCATGCACATCAGCTATGAGGCTGGGATC
CTGGAAAACCCCAAGAATCAAGCACCTCCGGGTCTCTACACAAAAACTCAGGACCCTGCCAAAGCACCCA
ACAGCCCAGATGTCCTTGAGATAGAATTCAAAAAAGGGGTCCCTGTGAAGGTGACCAACATCAAAGATGG
CACAACCCGCACCACATCCCTGGAACTCTTCATGTACCTGAACGAAGTTGCGGGCAAGCACGGAGTGGGT
CGCATTGACATCGTGGAGAACCGCTTCATTGGAATGAAGTCCCGAGGTATCTACGAGACCCCAGCAGGGA
CCATCCTTTACCACGCTCATT
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:TTCTGGCCTACAGTGGTGGC; Reverse Primer - name:unspecified, sequence:AATGAGCGTGGTAAAGGATG. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:9136 same embryo
 EMAGE:9134 same embryo
 EurExpress:euxassay_018659 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS