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EMAGE:9164

Kif5b kinesin family member 5B ( MGI:1098268)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9164 EMAGE:9164 EMAGE:9164 EMAGE:9164 EMAGE:9164
"Pseudo-wholemount" of euxassay_019750. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_019750_01 euxassay_019750_02 euxassay_019750_03 euxassay_019750_04
EMAGE:9164 EMAGE:9164 EMAGE:9164 EMAGE:9164 EMAGE:9164
euxassay_019750_05 euxassay_019750_06 euxassay_019750_07 euxassay_019750_08 euxassay_019750_09
EMAGE:9164 EMAGE:9164 EMAGE:9164 EMAGE:9164 EMAGE:9164
euxassay_019750_10 euxassay_019750_11 euxassay_019750_12 euxassay_019750_13 euxassay_019750_14
EMAGE:9164 EMAGE:9164 EMAGE:9164 EMAGE:9164 EMAGE:9164
euxassay_019750_15 euxassay_019750_16 euxassay_019750_17 euxassay_019750_18 euxassay_019750_19
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euxassay_019750_20 euxassay_019750_21 euxassay_019750_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9164Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9164_wholemount_strong.wlz
9164_wholemount_moderate.wlz
9164_wholemount_weak.wlz
9164_wholemount_possible.wlz
9164_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9164_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T56088
Entity Detected:Kif5b, kinesin family member 5B ( MGI:1098268)
Sequence:sense strand is shown

>T56088
TTGTTCAGGACTTGGCTACCAGGGTGAAAAAGAGCGCCGAGGTCGACTCTGACGACACTGGCGGCAGTGC
TGCACAGAAGCAGAAAATCTCCTTCCTTGAAAACAACCTTGAACAGCTCACCAAAGTGCACAAGCAGTTG
GTACGCGATAATGCAGATCTTCGCTGTGAACTTCCTAAGTTAGAGTTTCGGCTTAGAGCTACTGCAGAAA
GAGTGAAAGCTTTGGAGTCAGCCCTGAAAGAAGCCAAAGAAAATGCATCTCGAGACCGTAAACGCTATCA
GCAAGAAGTAGACCGGATAAAGGAAGCAGTCAGGTCAAAGAACATGGCCAGAAGGGGACATTCTGCCCAG
ATTGCAAAGCCGATCCGTCCTGGACAGCATCCAGCGGCCTCGCCAACTCACCCGGGCACAGTTCGTGGAG
GAGGCTCATTTGTTCAGAACAACCAGCCAGTGGGGCTTCGTGGTGGTGGAGGCAAGCAGTCGTAAACACT
TGACACATTGCAGGTGTTGAAAAGTAATTGAAGTTTGAAGAGGACATAAAATCAGTCTTTCACTAACTAA
CCTCTATTCCTTGGGATTGTAGAAATTTAATTTTTTAATGTGTAAATTACTCCTACCCTGTACAGCTGTT
TCCTACCCACTCTTGTAAACTCTGCTGCTTCCCAACACTAGAGTGCAATGTTGATGTCCTAGAAGGGAAA
CGACAGTTTACAACTGCGGCCCTGTTTGTTACACGGTGTGTCCTTCGTGTCTTCACTGTGCTGAGTAACT
GTGTTGAGGGACTCTGCTCCTTGATTTGCCTTTCTGTGAGTGTGTAATCTTGGTTTACATTACATAGCTG
CTATTGCTTTTCATTTTCCCTTTTCTACTAAAATGTCTTTTTTTTTAAAGGAAATATGGAACATTTAGAT
TAAATGTCTTAAATTTTACTACTTATAACACTACTTGCCACAAAATATATCAGGTCAGTCAGTACTGTAT
TTTAAAAATCCCTCAAGCAAGGTATGGTGGCACGCATCT
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:TTGTTCAGGACTTGGCTACCAGG; Reverse Primer - name:unspecified, sequence:AGATGCGTGCCACCATACCTTGC. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_019750 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS