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EMAGE:9538

Suv39h2 suppressor of variegation 3-9 homolog 2 (Drosophila) ( MGI:1890396)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9538 EMAGE:9538 EMAGE:9538 EMAGE:9538 EMAGE:9538
"Pseudo-wholemount" of euxassay_018389. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_018389_01 euxassay_018389_02 euxassay_018389_03 euxassay_018389_04
EMAGE:9538 EMAGE:9538 EMAGE:9538 EMAGE:9538 EMAGE:9538
euxassay_018389_05 euxassay_018389_06 euxassay_018389_07 euxassay_018389_08 euxassay_018389_09
EMAGE:9538 EMAGE:9538 EMAGE:9538 EMAGE:9538 EMAGE:9538
euxassay_018389_10 euxassay_018389_11 euxassay_018389_12 euxassay_018389_13 euxassay_018389_14
EMAGE:9538 EMAGE:9538 EMAGE:9538 EMAGE:9538 EMAGE:9538
euxassay_018389_15 euxassay_018389_16 euxassay_018389_17 euxassay_018389_18 euxassay_018389_19
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euxassay_018389_20 euxassay_018389_21 euxassay_018389_22 euxassay_018389_23 euxassay_018389_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9538Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9538_wholemount_strong.wlz
9538_wholemount_moderate.wlz
9538_wholemount_weak.wlz
9538_wholemount_possible.wlz
9538_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9538_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T51080
Entity Detected:Suv39h2, suppressor of variegation 3-9 homolog 2 (Drosophila) ( MGI:1890396)
Sequence:sense strand is shown

>T51080
AATGAAAGCTCCGCAAGATGGCGGCGGCCAGGGCCAAGGCACGGGGCAGTGAGGCAGGAGCGCGGTGTCA
CCGGGCTCCAGGTCCGCCCCCGAGGCCCAAGGCCAGGCGAACGGCGAGACGCCGCCGCGCGGAGACCCTG
ACGGCGCGACGCTCGCGGCCGTCTGCGGGCGAGAGGCGCGCCGGCTCCCAGCGAGCGTGGTCCGGAGCTC
CGCGGGCCGCGGTCTTTGGCGACGAGTGTGCACGAGGTGCCTTATTCAAGGCCTGGTGTGTGCCTTGCCT
AGTTTCACTTGATACTCTCCAGGAATTATGTAGAAAAGAAAAGCTCACATGTAAATCGATTGGAATCACC
AAAAGGAATCTAAACAATTATGAGGTGGAGTACTTGTGTGACTACAAGGTAGCAAAGGGTGTGGAATATT
ATCTTGTAAAATGGAAAGGATGGCCAGATTCTACAAACACCTGGGAGCCCTTGAGAAACCTCAGGTGTCC
ACAGCTCCTGCGGCAGTTCTCTGATGACAAGAAGACTTACTTAGCTCAGGAAAGGAAATGCAAGGCTGTC
AATTCAAAATCCTTGCAACCTGCAATTGCTGAGTATATTGTACAGAAAGCTAAGCAAAGAATAGCTCTGC
AGAGATGGCAAGATTACCTCAACAGAAGAAAGAACCATAAGGGGATGATATTTGTTGAAAACACTGTTGA
CTTGGAGGGCCCACCTTTAGACTTCTACTACATTAACGAGTACAGGCCAGCTCCCGGGATCAGCATAAAC
AGTGAAGCCACCTTTGGATGT
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:AATGAAAGCTCCGCAAGATG; Reverse Primer - name:unspecified, sequence:ACATCCAAAGGTGGCTTCAC. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_018389 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS