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EMAGE:9558

Iigp1 interferon inducible GTPase 1 ( MGI:1926259)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9558 EMAGE:9558 EMAGE:9558 EMAGE:9558 EMAGE:9558
"Pseudo-wholemount" of euxassay_018535. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_018535_01 euxassay_018535_02 euxassay_018535_03 euxassay_018535_04
EMAGE:9558 EMAGE:9558 EMAGE:9558 EMAGE:9558 EMAGE:9558
euxassay_018535_05 euxassay_018535_06 euxassay_018535_07 euxassay_018535_08 euxassay_018535_09
EMAGE:9558 EMAGE:9558 EMAGE:9558 EMAGE:9558 EMAGE:9558
euxassay_018535_10 euxassay_018535_11 euxassay_018535_12 euxassay_018535_13 euxassay_018535_14
EMAGE:9558 EMAGE:9558 EMAGE:9558 EMAGE:9558 EMAGE:9558
euxassay_018535_15 euxassay_018535_16 euxassay_018535_17 euxassay_018535_18 euxassay_018535_19
EMAGE:9558 EMAGE:9558 EMAGE:9558 EMAGE:9558 EMAGE:9558
euxassay_018535_20 euxassay_018535_21 euxassay_018535_22 euxassay_018535_23 euxassay_018535_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9558Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9558_wholemount_strong.wlz
9558_wholemount_moderate.wlz
9558_wholemount_weak.wlz
9558_wholemount_possible.wlz
9558_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9558_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50549
Entity Detected:Iigp1, interferon inducible GTPase 1 ( MGI:1926259)
Sequence:sense strand is shown

>T50549
CTTTATTGCTTGAAGTCATGGGTCAGCTGTTCTCTTCACCTAAGAGTGATGAGAATAATGATTTGCCCTC
CAGCTTTACTGGTTATTTTAAGAAATTTAATACGGGAAGAAAAATCATTTCTCAAGAGATCCTCAATTTG
ATTGAATTAAGGATGAGAAAAGGGAATATTCAGTTGACAAACTCTGCAATCAGTGATGCATTAAAAGAAA
TCGATAGTAGTGTGCTCAATGTTGCTGTCACCGGGGAGACGGGATCAGGGAAGTCCAGCTTCATCAATAC
CCTGAGAGGCATTGGGAATGAAGAAGAAGGTGCAGCTAAAACTGGGGTGGTGGAGGTAACCATGGAAAGA
CATCCATACAAACACCCCAATATACCCAATGTGGTTTTTTGGGACCTGCCTGGGATTGGAAGCACAAATT
TCCCACCAGACACTTACCTGGAGAAAATGAAGTTCTATGAGTACGATTTCTTCATTATTATTTCGGCCAC
ACGCTTCAAGAAAAATGATATAGACATTGCCAAAGCAATCAGCATGATGAAGAAGGAATTCTACTTCGTG
AGAACCAAGGTGGACTCTGACATAACAAATGAAGCAGATGGCAAACCTCAAACCTTTGACAAAGAAAAGG
TCCTGCAGGACATCCGCCTTAACTGTGTGAACACCTTTAGGGAGAATGGCATTGCTGAGCCACCAATCTT
CCTGCTCTCTAACAAAAATGTTTGTCACTATGACTTCCCCGTCCTGATGGACAAGCTGATAAGTGACCTC
CCTATCTACAAGAGACACAATTTTATGGTCTCCTTACCCAATATCACAGATTCAGTCATTGAAAAGAAGC
GGCAATTTCTGAAGCAGAGGATTTGGCTGGAAGGATTTGCTGCTGACCTAGTGAATATCATCCCTTCTCT
GACCTTTCTCTTGGACAGTGATTTGGAGACTCTGAAGAAAAGCATGAAATTCTACCGCACTGTGTTTGGA
GTGGATGAAACATCTTTGCAGAGATTAGCTAGGGACTGGGAAATAGAGGTGGATCAGGTGGAGGCCATGA
TAAAATCTCCTGCTGTGTTCAAACCTACAGATGAAGAAACAATACAAGAAAGGCTTTCAAGATATATTCA
GGAGTTCTGTTTGGCTAATGGGTACTTACTTCCTAA
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:CTTTATTGCTTGAAGTCATGG; Reverse Primer - name:unspecified, sequence:TTAGGAAGTAAGTACCCATTAGC. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:9556 same embryo
 EMAGE:9555 same embryo
 EMAGE:9557 same embryo
 EurExpress:euxassay_018535 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS