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EMAGE:9736

Fhl1 four and a half LIM domains 1 ( MGI:1298387)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9736 EMAGE:9736 EMAGE:9736 EMAGE:9736 EMAGE:9736
"Pseudo-wholemount" of euxassay_018418. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_018418_01 euxassay_018418_02 euxassay_018418_03 euxassay_018418_04
EMAGE:9736 EMAGE:9736 EMAGE:9736 EMAGE:9736 EMAGE:9736
euxassay_018418_05 euxassay_018418_06 euxassay_018418_07 euxassay_018418_08 euxassay_018418_09
EMAGE:9736 EMAGE:9736 EMAGE:9736 EMAGE:9736 EMAGE:9736
euxassay_018418_10 euxassay_018418_11 euxassay_018418_12 euxassay_018418_13 euxassay_018418_14
EMAGE:9736 EMAGE:9736 EMAGE:9736 EMAGE:9736 EMAGE:9736
euxassay_018418_15 euxassay_018418_16 euxassay_018418_17 euxassay_018418_18 euxassay_018418_19
EMAGE:9736 EMAGE:9736 EMAGE:9736 EMAGE:9736 EMAGE:9736
euxassay_018418_20 euxassay_018418_21 euxassay_018418_22 euxassay_018418_23 euxassay_018418_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9736Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9736_wholemount_strong.wlz
9736_wholemount_moderate.wlz
9736_wholemount_weak.wlz
9736_wholemount_possible.wlz
9736_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9736_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50414
Entity Detected:Fhl1, four and a half LIM domains 1 ( MGI:1298387)
Sequence:sense strand is shown

>T50414
ATTGCGTGAAGTGCAACAAGGCCATCACATCTGGAGGAATCACTTACCAGGATCAGCCCTGGCATGCCGA
GTGCTTTGTGTGTGTTACCTGCTCTAAGAAGCTGGCTGGGCAGCGTTTCACCGCTGTGGAGGACCAGTAT
TACTGCGTGGATTGCTACAAGAACTTTGTGGCCAAGAAGTGTGCTGGATGCAAGAACCCCATCACTGGGT
TTGGTAAAGGCTCCAGTGTGGTGGCCTATGAAGGACAATCCTGGCACGACTACTGCTTCCACTGCAAAAA
ATGCTCCGTGAATCTGGCCAACAAGCGCTTTGTATTTCATAATGAGCAGGTGTATTGCCCTGACTGTGCC
AAAAAGCTGTAACTTGACAGGGGCTCCTGTCCTGTAAAATGGCATTGGAACCATTCTTTGTGTCCTTTGC
TCCCTCCCTCCCTCTGTACCATCCATAGGGCAAGAGTGGGCTTTCACCTCTTTAAAGTTGCTCTTTCCGT
CTTTTCTCCCATTTTACAGTATTAATCAACGAAGGACACACAGTGATCATATTAAGATTTAGCAAAGAGC
AACCTTGCAGCAAAAATAATTTCTCTGTTGCTGCACTGGAAAAACAAAACCTTAGACTGACTCTTCTGCA
TGTTTCTCATAGAGCAGAAAAGTGCTAACCATGTAGCCACTTCACGATGTAAACGAGAAGCATAGGCGAT
AAAGCTCCCACTGAGACACCTTTGGGGCTCAGTCTGGATGCGCTGTGCGGTCACGTGACTGCGGTGTAAG
AGTTGCAGCGGCTGCTCCAACTCCCTTCTCGCCTTCTCTGGGCAGTTAAGAACTTGCCAGAATGCATGGT
TTAACTTCCTTATCAAAACTCTGACCTTCCTTCTGTTCTTTTGTGCTTTCACACGACTAACACAGATTTC
CAGAGAATTAACATTTTGAACTTTGTTGTAATTCTCAAGTGACTTTTCCCCCATACTAACATTTGACTCC
CTTACGTGGCGTGTTCTCTGAG
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:ATTGCGTGAAGTGCAACAAG; Reverse Primer - name:unspecified, sequence:CTCAGAGAACACGCCACGTA. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_018418 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS