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EMAGE:994

Foxj1 forkhead box J1 ( MGI:1347474)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:994
Figure 5G of Furuta et al., 1997 [PMID:9187146] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: one star
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Arrowhead indicates expression in dorsal midline of telencephalon.
Expression Pattern Description
Spatial Annotation:
EMAGE:994EMAGE:994Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mapping3D context movie

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
994_voxel_strong_3D_1.wlz
994_voxel_weak_3D_1.wlz
994_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:994_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
diencephalon
moderate moderate
regionalVery weak in dorsal midline around telencephalon/diencephalon boundary.
telencephalon
moderate moderate
regionalVery weak in dorsal midline around telencephalon/diencephalon boundary.
future hindbrain
strong strong
regionalExpression is high in the roof of the hindbrain.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1275943
Entity Detected:Foxj1, forkhead box J1 ( MGI:1347474)
Notes:The Foxj1 (Hfh4) probe used in this study by Furuta et al., 1997 [PMID:9187146] is described as "a 3' 1.5 kb fragment of Hfh4 (kindly provided by Dr Robert Costa)." Probe end points undefined.
Chemistry:RNA
Strand:antisense
Label:S35
Specimen
Organism:mouse
Strain:ICR
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:section
Procedures
Staining procedure:autoradiography
General Information
Authors:Furuta et al., 1997 [PMID:null] 9187146 Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:9187146] Furuta Y, Piston DW, Hogan BL 1997 Bone morphogenetic proteins (BMPs) as regulators of dorsal forebrain development. Development (124):2203-12
Links:MGI:1277829 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI