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EMAGE:9969

Csnk1e casein kinase 1, epsilon ( MGI:1351660)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9969 EMAGE:9969 EMAGE:9969 EMAGE:9969 EMAGE:9969
"Pseudo-wholemount" of euxassay_018818. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_018818_01 euxassay_018818_02 euxassay_018818_03 euxassay_018818_04
EMAGE:9969 EMAGE:9969 EMAGE:9969 EMAGE:9969 EMAGE:9969
euxassay_018818_05 euxassay_018818_06 euxassay_018818_07 euxassay_018818_08 euxassay_018818_09
EMAGE:9969 EMAGE:9969 EMAGE:9969 EMAGE:9969 EMAGE:9969
euxassay_018818_10 euxassay_018818_11 euxassay_018818_12 euxassay_018818_13 euxassay_018818_14
EMAGE:9969 EMAGE:9969 EMAGE:9969 EMAGE:9969 EMAGE:9969
euxassay_018818_15 euxassay_018818_16 euxassay_018818_17 euxassay_018818_18 euxassay_018818_19
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euxassay_018818_20 euxassay_018818_21 euxassay_018818_22 euxassay_018818_23 euxassay_018818_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9969Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9969_wholemount_strong.wlz
9969_wholemount_moderate.wlz
9969_wholemount_weak.wlz
9969_wholemount_possible.wlz
9969_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9969_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50203
Entity Detected:Csnk1e, casein kinase 1, epsilon ( MGI:1351660)
Sequence:sense strand is shown

>T50203
AATGAGGAGAGCGAGCACAGACCAGTGTTTGCTATGTGTCTTCACTGCATTTTCTTTAAAAAAAAAAAAT
TAAATACAAATAAGAGAAAGGACAGAAAGAAAGAACAGTTCACATGAACAAAAAAGAGAAAAACAAACAA
ACCACAAAACCCACAACCCAGCACAAAGTCGACAATGGATTTTGTTTCTTTGATTTATTTTGCCAATGGC
AAAAAGACAAGACCTCGTTAGCACTGAGGATTCTTGTTCCCTTGCCTTGTCCACTGCTCCCGACCTGAAG
GCTGCCAACACTCCTCTAAGGATACTGGGTCACATGCCAGCCACCTGTTTTCGCCACCGGCCACCACGTG
CCGGGCCGCCATCGGAGGTGCCTGAAGAGCTTGTGTCAGGGAGCGGTTTGGCCAGTCAGAGACAAGTCCC
AAGAGATTTCATGGAGCCTTGGATGACACACACGCCATCAGCCCTTGGGTGATGACAGTGACCAGTGTTG
TATGGGGCTTTCCCAGAATCCCCTTCCCTGAGCATCCTGGTCTCCCCCACACACACCTGTCACCTCTCTA
CAGAGACCCTGAGGGTGCGGTGAGATGGAGGCCATGATGCCTTGTGTGACTGTGAGTGTGTGTGTGTATG
CATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTGAGAGAGAGAGAGAGAGAGACTGAG
AGACTGACTGAGAGACTGCTGACTTGTATTTTTCAGAGCTGCAGGTGGCCTGCCACTCCTGCCTGGCCAA
GTTTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAATGACTTCCACATCCCTCAGGGCATAGAG
TCCTTGCCACCA
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:unspecified; Reverse Primer - name:unspecified, sequence:unspecified. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:9970 same embryo
 EMAGE:9968 same embryo
 EurExpress:euxassay_018818 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS