Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:10716

Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 ( MGI:1914778)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:10716 EMAGE:10716 EMAGE:10716 EMAGE:10716 EMAGE:10716
"Pseudo-wholemount" of euxassay_003167. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003167_01 euxassay_003167_02 euxassay_003167_03 euxassay_003167_04
EMAGE:10716 EMAGE:10716 EMAGE:10716 EMAGE:10716 EMAGE:10716
euxassay_003167_05 euxassay_003167_06 euxassay_003167_07 euxassay_003167_08 euxassay_003167_09
EMAGE:10716 EMAGE:10716 EMAGE:10716 EMAGE:10716 EMAGE:10716
euxassay_003167_10 euxassay_003167_11 euxassay_003167_12 euxassay_003167_13 euxassay_003167_14
EMAGE:10716 EMAGE:10716 EMAGE:10716 EMAGE:10716 EMAGE:10716
euxassay_003167_15 euxassay_003167_16 euxassay_003167_17 euxassay_003167_18 euxassay_003167_19
EMAGE:10716 EMAGE:10716 EMAGE:10716 EMAGE:10716 EMAGE:10716
euxassay_003167_20 euxassay_003167_21 euxassay_003167_22 euxassay_003167_23 euxassay_003167_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:10716Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
10716_wholemount_strong.wlz
10716_wholemount_moderate.wlz
10716_wholemount_weak.wlz
10716_wholemount_possible.wlz
10716_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:10716_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4915
Entity Detected:Nudt7, nudix (nucleoside diphosphate linked moiety X)-type motif 7 ( MGI:1914778)
Sequence:sense strand is shown

>T4915
GCTTCCCGAAGTCTCCTGCTGCTAGTAAGAGGAAGTACTGCAGGGCTGATGTCGCGACCTTGTGGACTCC
CGGAGCCTGTCAGAAACAATCTGATAGATGATGCCAAGGCTCGCCTGAGAAAGTCTGATGTCGGGACCAG
ATATTCTCACCTGTCCTCTAATAAATTCTCTGTCCTTGTACCACTGCTGGCCAGAGGAGGAAAGTTGTAT
TTGATGTTCACGGTCCGCTCAGACAAGCTGAAAAGGGAACCTGGAGAAGTCTGCTTCCCTGGAGGAAAGA
GGGACCCGGTGGACACAGATGACACAGCCACTGCTCTCCGTGAAGCCCAGGAGGAGGTGGGGCTGCATCC
CCACCAAGTGGAGGTGGTCTCTCACCTGGTGCCATACGTATTTGATAATGATGCACTGGTAACCCCCGTA
GTGGGTTTTCTAGACCACAACTTCCAGGCCCAACCTAATGCTGATGAAGTGAAGGAAGTCTTCTTTGTGC
CTTTGGACTATTTCCTCCATCCCCAAGTCTACTACCAGAAGCAAATCACACAGTCTGGCCGTGATTTCAT
CATGCATTGCTTCGAGTACAAAGACCCTGAGACTGGTGTGAACTACCTAATCCAGGGAATGACCTCAAAA
CTGGCTGTGTTGGTGGCCTTAATTATTTTGGAACAAAGTCCTGCCTTCAAGATTGATTTTGATCTCCATG
ACCTGATACCGTCTTGTGAAAGGACCTTCCTTTGGAGATATTCTTTAAGCAAGTTGTGAAGACCCTGAAA
CCCAAAAGAACGTACATGAGGTTTTTGTGTGAGCTTATGCTCAGAACAACAGTGTTTAGCAAGTGGCATC
TGACAGGTGTGAATATTTTCCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAGA
ACACTAAAAGTCTTTCAAAACTGGAAAAATGCACTGGCAGGGGAGAATAATTTTACCCATTTAAAAAAAT
GGCACGATTTTTAGTCATATTAGGGATATCTGTCACATAGTAGGCACTTAATAAATATTTGTCAAATAAA
AAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5102473 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5102473 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:10718 same embryo
 EMAGE:10719 same embryo
 EMAGE:10715 same embryo
 EMAGE:10717 same embryo
 EMAGE:10720 same embryo
 EurExpress:euxassay_003167 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS