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EMAGE:10948

Akr1b3 aldo-keto reductase family 1, member B3 (aldose reductase) ( MGI:1353494)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:10948 EMAGE:10948 EMAGE:10948 EMAGE:10948 EMAGE:10948
"Pseudo-wholemount" of euxassay_003655. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003655_01 euxassay_003655_02 euxassay_003655_03 euxassay_003655_04
EMAGE:10948 EMAGE:10948 EMAGE:10948 EMAGE:10948 EMAGE:10948
euxassay_003655_05 euxassay_003655_06 euxassay_003655_07 euxassay_003655_08 euxassay_003655_09
EMAGE:10948 EMAGE:10948 EMAGE:10948 EMAGE:10948 EMAGE:10948
euxassay_003655_10 euxassay_003655_11 euxassay_003655_12 euxassay_003655_13 euxassay_003655_14
EMAGE:10948 EMAGE:10948 EMAGE:10948 EMAGE:10948 EMAGE:10948
euxassay_003655_15 euxassay_003655_16 euxassay_003655_17 euxassay_003655_18 euxassay_003655_19

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:10948Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
10948_wholemount_strong.wlz
10948_wholemount_moderate.wlz
10948_wholemount_weak.wlz
10948_wholemount_possible.wlz
10948_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:10948_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6789
Entity Detected:Akr1b3, aldo-keto reductase family 1, member B3 (aldose reductase) ( MGI:1353494)
Sequence:sense strand is shown

>T6789
CCACGCGTCCGTTTAAAGGTGCGCGCCCGAGCCAGCGCTGCACATTTGCCGGTCCGGGTTTGTAACGTGC
AGCGATCATGGCCAGCCATCTGGAACTCAACAACGGCACCAAGATGCCCACCCTGGGCCTGGGCACCTGG
AAGTCCCCTCCTGGCCAGGTGACTGAGGCCGTGAAAGTTGCTATTGACTTGGGGTACCGCCACATTGACT
GCGCCCAGGTGTACCAGAATGAGAAGGAGGTGGGAGTGGCCCTCCAGGAGAAGCTCAAGGAGCAGGTGGT
GAAGCGGCAGGATCTCTTCATTGTCAGCAAGCTGTGGTGCACGTTCCATGACAAGAGCATGGTGAAAGGA
GCCTTCCAGAAGACACTGAGCGACCTGCAGCTGGACTACCTGGATCTCTACCTTATTCACTGGCCAACGG
GGTTCAAGCCTGGGCCCGACTATTTCCCACTGGATGCCTCAGGGAACGTGATACCTAGTGACACCGATTT
TGTGGACACTTGGACGGCTATGGAACAACTAGTGGATGAAGGTTTGGTGAAAACAATCGGTGTCTCCAAC
TTCAACCCTCTTCAGATTGAGAGGATCTTGAACAAACCTGGCTTAAAATATAAGCCTGCGGTGAACCAGA
TCGAGTGCCACCCGTACCTAACTCAGGAGAAGCTGATTGAATACTGCCACAGCAAAGGCATCGTGGTGAC
AGCATATAGTCCCCTTGGTTCTCCTGACAGGCCCTGGGCCAAGCCTGAAGATCCGTCTCTCCTGGAGGAT
CCCAGGATCAAAGCAATTGCAGCCAAGTACAATAAAACTACAGCCCAGGTGCTGATCCGGTTCCCCATTC
AGAGGAACTTGGTAGTGATCCCCAAGTCGGTGACACCAGTGCGCATTGCTGAGAACTTGAAGGTCTTTGA
CTTTGAGCTGAGCAGCGAGGACATGGCCACTCTACTCAGCTACAACAGGAACTGGAGGGTGTGCGCCTTG
ATGAGCTGTGCCAAACACAAGGATTACCCCTTCCACGCCGAAGTCTGAAGCTGTGGCGAGCGGATCCCTG
CTCCTCCTCAAGTGGCTTGCACCTGTTCTTTCTGCCTCATCTGCCCTTGCAAGTGTCCTGTGTCTGCACT
AGGTGGCACCTTGCAAACCAGATGGTGAGAGTTAGTTAGTTTGACATAGAGTCTGGAGGGCAGTACCAGT
AGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCCCCTGGAGGACTTTAACACAAGTAC
CCTTTCCAACCAAAGAGAAGCAAGCTTTAGAGTCCAAGCCGTGCCACTAACACTTAAATGTGAGTGCTTA
GAACTGTAATCCTTTGGGTCAGACTTCTCCTTGCCTCAAATAAAAACTGCTTTTGTGAAAAAAAAAAAAA
AA
Notes:The probe template was PCR amplified from IMAGE:3708927 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3708927 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:10946 same embryo
 EMAGE:10944 same embryo
 EMAGE:10947 same embryo
 EMAGE:10945 same embryo
 EurExpress:euxassay_003655 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS