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EMAGE:11091

Elk1 ELK1, member of ETS oncogene family ( MGI:101833)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11091 EMAGE:11091 EMAGE:11091 EMAGE:11091 EMAGE:11091
"Pseudo-wholemount" of euxassay_006574. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_006574_01 euxassay_006574_02 euxassay_006574_03 euxassay_006574_04
EMAGE:11091 EMAGE:11091 EMAGE:11091 EMAGE:11091 EMAGE:11091
euxassay_006574_05 euxassay_006574_06 euxassay_006574_07 euxassay_006574_08 euxassay_006574_09
EMAGE:11091 EMAGE:11091 EMAGE:11091 EMAGE:11091 EMAGE:11091
euxassay_006574_10 euxassay_006574_11 euxassay_006574_12 euxassay_006574_13 euxassay_006574_14
EMAGE:11091 EMAGE:11091 EMAGE:11091 EMAGE:11091 EMAGE:11091
euxassay_006574_15 euxassay_006574_16 euxassay_006574_17 euxassay_006574_18 euxassay_006574_19
EMAGE:11091 EMAGE:11091 EMAGE:11091 EMAGE:11091
euxassay_006574_20 euxassay_006574_21 euxassay_006574_22 euxassay_006574_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11091Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11091_wholemount_strong.wlz
11091_wholemount_moderate.wlz
11091_wholemount_weak.wlz
11091_wholemount_possible.wlz
11091_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11091_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8090
Entity Detected:Elk1, ELK1, member of ETS oncogene family ( MGI:101833)
Sequence:sense strand is shown

>T8090
AAGAGGTAATCCCAGGGGCGGCTTCTGGTTGCTGCTTCTGCTGTCGCCGCCACCACCGCCGCCGCCTTGG
AACCGGGGCCTGGGGGACGGTGGGGCCTCGTATGGAGCCCCCGCCCCCCGGAGCTGCCACTGCCACCGCC
GCGCCACTCGCAGGTACTCCTGGAATGGCGTGAGTGCTTCCCTAGTGATGGACCCATCTGTGACGCTGTG
GCAGTTTCTGCTGCAGCTTCTGAGAGAACAAGGTAATGGCCACATCATCTCCTGGACCTCACGGGATGGT
GGTGAGTTCAAGTTGGTGGATGCAGAGGAGGTGGCCCGGCTATGGGGACTGCGCAAGAACAAGACCAACA
TGAATTACGACAAGCTTAGCCGGGCCTTGCGGTACTACTATGATAAGAATATCATCCGCAAGGTGAGCGG
CCAGAAGTTTGTCTACAAGTTTGTGTCCTACCCAGAGGTTGCAGGGTGCTCCACTGAAGACTGCCCACCC
CAGCCTGAGGTGTCTGTAACCTCGGCCATAGCCATGGCCCCTGCTACTGCCCATGCAGGCCCAGGGGACA
CGGCCACTGGAAAGCCAGGAACACCAAAGGGTGCAGGAATGACAGGCCAAGGTGGCTTAGCACGAAGCAG
CCGGAATGAATACATGCGCTCGGGCCTCTATTCTACCTTCACAATACAATCCCTGCAGCCACAGCCACAG
CCACCCATTCCTCCTCGGCCTGCCTCAGTGCTTCCCAACACTACCCCTGCAGGAGTACCAGCACCCGCCT
CAGGGAGCAGGAGCACCAGTCCAAACCCCTTAGAAGCCTGTTTGGAAGCAGAAGAGGCTGGTCTGCCCCT
GCAGGTTATCCTAACCCCACCAGAGGCCCCAAACCAGAAATCCGAAGAGTTGAGTCTGGACCCAAGTTTT
GGCCATCCACAGCCCCCAGAAGTCAAAGTGGAGGGGCCTAAGGAAGAATTGGAAGCTGCAAGGGCTGGAG
GCTTCAGTTCAGAAGCTGTCAAAGCTGAACCAGAAGTCTCAGCCTCAGAAGGTCTGCTGGCTCGGCTCCC
AGCCATCCTAACAGAGAACACAGCCCAGGTGTGTGGCCTCTCCACTTCCACCACTGAGATCACCCAACCG
CAGAAGGGCCGAAAGCCTCGGGACCTGGAACTTCCACTTAGCCCAAGCCTGCTGGGTGGCCAGGGACCTG
AACGGACTCCAGGATCAGGAACAAGCTCTGGTCTTCAGGCACCGGGGCCAGCGCTAACGCCATCCCTGCT
CCCCACACATACCTTGACCCCGGTGCTGCTGACACCCAGCTCGCTGCCCCCTAGCATCCATTTCTGGAGC
ACTCTGAGTCCAATTGCACCCCGTAGTCCAGCCAAGCTCTCCTTCCAGTTTCCGTCCAGTGGCAGCGCAC
AGGTGCACATCCCTTCCATCAGTGTGGATGGCCTCTCGACCCCCGTGGTGCTCTCCCCAGGGCCCCAGAA
GCCATGACTACCACCACCACCCCTTTTTTGGAGTCCATCCATCTATGCTCCTGAACTCTCCAGTTAGCCA
TCTCAAGGAGAAACATAGTTAAACTGACAGACTTAAGCTCTGATTGTGGTGGGGTGGATATTCCTGGAAA
AGTGAATATTTCACTAACTCCTCCACCCAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:30045506 using vector (pSPORT1) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30045506 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11092 same embryo
 EMAGE:11093 same embryo
 EMAGE:11090 same embryo
 EurExpress:euxassay_006574 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS