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EMAGE:11298

Ilk integrin linked kinase ( MGI:1195267)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11298 EMAGE:11298 EMAGE:11298 EMAGE:11298 EMAGE:11298
"Pseudo-wholemount" of euxassay_003622. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003622_01 euxassay_003622_02 euxassay_003622_03 euxassay_003622_04
EMAGE:11298 EMAGE:11298 EMAGE:11298 EMAGE:11298 EMAGE:11298
euxassay_003622_05 euxassay_003622_06 euxassay_003622_07 euxassay_003622_08 euxassay_003622_09
EMAGE:11298 EMAGE:11298 EMAGE:11298 EMAGE:11298 EMAGE:11298
euxassay_003622_10 euxassay_003622_11 euxassay_003622_12 euxassay_003622_13 euxassay_003622_14
EMAGE:11298 EMAGE:11298 EMAGE:11298 EMAGE:11298 EMAGE:11298
euxassay_003622_15 euxassay_003622_16 euxassay_003622_17 euxassay_003622_18 euxassay_003622_19
EMAGE:11298 EMAGE:11298 EMAGE:11298
euxassay_003622_20 euxassay_003622_21 euxassay_003622_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11298Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11298_wholemount_strong.wlz
11298_wholemount_moderate.wlz
11298_wholemount_weak.wlz
11298_wholemount_possible.wlz
11298_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11298_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6672
Entity Detected:Ilk, integrin linked kinase ( MGI:1195267)
Sequence:sense strand is shown

>T6672
CCCCAGTCCCGGGGTCTCTGTGCCGGGACGCTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAA
CGCGGTGGCGGTGCGCTTGTGGCTGGACAACACAGAGAACGACCTCAATCAGGGGGATGATCATGGCTTC
TCCCCCTTGCACTGGGCCTGCCGAGAAGGCCGCTCTGCGGTGGTTGAAATGCTGATCATGCGTGGAGCAC
GGATTAATGTGATGAATCGTGGGGATGATACCCCCCTGCACCTGGCAGCTAGTCATGGACACCGTGACAT
TGTACAGAAGCTGTTGCAATACAAGGCTGACATCAATGCAGTGAATGAGCACGGCAATGTGCCACTTCAC
TATGCATGTTTCTGGGGCCAAGACCAGGTGGCAGAGGACCTGGTGGCTAACGGGGCTCTTGTGAGCATCT
GTAACAAGTATGGAGAGATGCCTGTGGACAAAGCCAAGGCACCCCTTAGAGAGCTTCTCCGAGAACGGGC
AGAGAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGAAGGGGACCACTCGCACA
AGGCCCCGAAATGGGACCCTGAACAAACACTCCGGTATTGACTTCAAACAGCTCAACTTTCTGGCAAAGC
TCAATGAGAATCATTCTGGAGAGCTTTGGAAAGGCCGCTGGCAGGGCAATGATATTGTTGTGAAGGTGCT
GAAGGTTCGAGACTGGAGTACAAGGAAAAGCAGGGACTTCAATGAGGAATGTCCCCGGCTCAGGATTTTC
TCACACCCTAACGTGCTCCCAGTGCTAGGTGCTTGCCAGGCTCCCCCAGCCCCCCACCCAACCCTCATCA
CACACTGGATGCCATATGGATCTCTCTACAATGTTCTACATGAAGGCACCAATTTCGTTGTGGACCAGAG
CCAAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTTCTTCACACACTAGAGCCTCTCATA
CCCCGGCATGCACTCAATAGCCGCAGTGTAATGATCGATGAAGATATGACTGCCCGAATCAGCATGGCTG
ATGTTAAGTTTTCTTTCCAGTGCCCTGGGCGCATGTATGCGCCTGCCTGGGTGGCCCCTGAAGCCCTGCA
GAAGAAGCCTGAAGACACAAACAGACGCTCAGCAGACATGTGGAGTTTCGCGGTGCTTCTGTGGGAACTG
GTGACACGAGAGGTGCCCTTTGCTGACCTCTCTAATATGGAGATTGGGATGAAGGTGGCACTGGAAGGCC
TTCGGCCTACCATCCCACCAGGTATTTCCCCCCATGTGTGTAAGCTCATGAAGATTTGCATGAATGAAGA
CCCTGCAAAGCGACCCAAGTTTGACATGATTGTGCCTATCTTGGAGAAGATGCAGGACAAGTAGGACCTT
CAGGTCCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGAC
CTCTGGTTGCCTCCCCTGTCTCTAATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCC
CTACCACTGTAGCCCCAAAAGGGGCTGGGCTCAGAGCTTTGTCACTTGCCACATGATGTCTCCCAACATG
GGAGGGATCAGCCCCGCCTGTCACAATAAAGTTTATTATGAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3601214 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3601214 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11297 same embryo
 EMAGE:11296 same embryo
 EMAGE:11300 same embryo
 EMAGE:11295 same embryo
 EMAGE:11299 same embryo
 EurExpress:euxassay_003622 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS