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EMAGE:13198

Spire1 spire homolog 1 (Drosophila) ( MGI:1915416)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:13198 EMAGE:13198 EMAGE:13198 EMAGE:13198 EMAGE:13198
"Pseudo-wholemount" of euxassay_017435. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_017435_01 euxassay_017435_02 euxassay_017435_03 euxassay_017435_04
EMAGE:13198 EMAGE:13198 EMAGE:13198 EMAGE:13198 EMAGE:13198
euxassay_017435_05 euxassay_017435_06 euxassay_017435_07 euxassay_017435_08 euxassay_017435_09
EMAGE:13198 EMAGE:13198 EMAGE:13198 EMAGE:13198 EMAGE:13198
euxassay_017435_10 euxassay_017435_11 euxassay_017435_12 euxassay_017435_13 euxassay_017435_14
EMAGE:13198 EMAGE:13198 EMAGE:13198 EMAGE:13198 EMAGE:13198
euxassay_017435_15 euxassay_017435_16 euxassay_017435_17 euxassay_017435_18 euxassay_017435_19
EMAGE:13198 EMAGE:13198 EMAGE:13198
euxassay_017435_20 euxassay_017435_21 euxassay_017435_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:13198Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
13198_wholemount_strong.wlz
13198_wholemount_moderate.wlz
13198_wholemount_weak.wlz
13198_wholemount_possible.wlz
13198_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:13198_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T9454
Entity Detected:Spire1, spire homolog 1 (Drosophila) ( MGI:1915416)
Sequence:sense strand is shown

>T9454
AAAGCATTGGACTATGGCTTGAAGGAAAACGAAGAAAGGGAGCTGAGCCCTCCTCTAGAGCAGCTCATCG
ACCAAATGGCCAATACCGTGGAGGCTGACGGGAGCAAGGATGAAGGGTACGAGGCTGCAGATGAAGGCCC
GGAAGATGAAGACGGAGAGAAGAGAAGCATCTCAGCCATCCGGTCCTATCAGGACGTTATGAAGATCTGT
GCTGCTCACCTCCCAACTGAGTCGGAGGCACCCAATCATTATCAGGCAGTATGTCGGGCCCTGTTCGCAG
AAACCATGGAACTGCATACATTTCTGACCAAAATTAAGAGTGCAAAGGAGAACCTTAAGAAGATTCAAGA
AATGGAAAAGGGTGATGAATCTAGCACAGATCTGGAGGACCTGAAAAATGCAGACTGGGCCCGGTTCTGG
GTACAAGTGATGAGGGATTTGCGAAATGGGGTAAAACTTAAGAAAGTCCAGCAGCGGCAGTACAACCCTC
TGCCCATTGAGTACCAACTGACCCCTTATGAGATGCTCATGGACGACATTCGGTGCAAAAGATACACCTT
GAGAAAAGTAATGGTAAATGGTGACGTCCCCCCTCGGTTGAAAAAGAGTGCTCATGAGGTCATCCTTGAC
TTTATCAGATCAAGACCCCCTTTAAATCCAGTTTCAGCCAGAAAACTGAAACCAACCCCACCACGGCCAC
GGAGCCTCCATGAAAGAATATTAGAAGAAATTAAAGCAGAAAGAAAGCTTCGACCTGTGTCACCAGAAGA
AATTAGACGGAGCAGACTAGTGCGGCCACTTAGCATGTCTCACAGTTTTGACTTGTCAGATGTCACTACG
CCAGAATCTCCAAAGAATGTTGGAGAATCATCTATGGTGAATGGAGGCTTAACATCTCAAACAAAAGAAA
ATGGGCTGAGCGCTGCCCAGCAGGGGTCTGCGCAGAGGAAGAGGCTCCTCAAAGCCCCAACCCTGGCTGA
ACTGGACAGCTCTGACTCTGAGGAGGAAAAAAGTCTGCACAAGTCAACCAGCAGCAGCAGTGCGTCTCCC
TCCCTCTATGAGGATCCAGTACTGGAGGCCATGTGCTCCAGGAAGAAGCCTCCAAAATTCTTGCCCATCT
CATCAACACCCCAGCCAGAGAGAAGGCAGCCACCGCAGAGGCGCCACTCCATTGAGAAGGAAACACCTAC
GAACGTGAGGCAGTTTCTGCCACCATCCAGGCAGAGCTCACGGTCTCTTGAGGAATTCTGCTACCCAGTG
GAGTGCCTCGCTCTCACTGTGGAGGAAGTGATGCACATCCGTCAGGTCCTGGTGAAAGCAGAGCTGGAAA
AGTACCAACAGTATAAGGATGTCTACACTGCCCTGAAAAAAGGAAAGCTCTGCTTCTGTTGCCGAACCCG
GAGGTTTTCCTTCTTCACCTGGTCTTACACCTGTCAGTTCTGTAAGAGGCCCGTGTGCTCACAGTGTTGC
AAAAAGATGCGGCTGCCTTCCAAGCCATACTCTACTCTACCTATCTTCTCTTTGGGACCTTCTGCCTTGC
AAAGGGGGGAAAGCTGTTCGAGGTCAGAAAAACCCTCCACTAGTCACCATCGGCCTCTTCGAAGTATTGC
CAGGTTCTCCACAAAATCCAGGTCTGTGGACAAGTCCGATGAGGAGCTCCAGTTTCCCAAAGAGCTCATG
GAGGACTGGAGCACGATGGAGGTGTGTGTGGACTGCAAAAAGTTCATCTCCGAGATCATCAGCTCAAGCC
GGCGCAGCCTGGTGCTGGCTAACAAAAGAGCCAGGTTGAAAAGGAAGACACAGTCTTTCTACATGTCCTC
GGCGGGCCCCTCGGAGTACTGCCCTTCAGAACGGACTATCAACGAGATCTGAGCCCTGTGCCTTCCCGCT
CTTTTGTGTGCAGAGCGGGCAGTGCAACAGTGCTGCAGGACTCTTCCCAGGGGTTTCCTTCACAGGCTCC
GTCTGCAGCAGGTCAGGCCTGGGCTGCACCTGAGACACAGACTCAAGGCTGTGTTCATATCAGCCGATGG
TTGGTAGGAGGCAGGTCAGCCACTTGGTCATTTGCACTCAGAAAGCCTAAAACTTGATTTTGTGTATGTG
AGTCGGGAAGCTAGAAACTTCCTTAGTTCAGTTCCTCAATGTTCTTCGGATAATTTCCTGACTAAGGCAA
AAAGCTTCTTGTGTGTGAAGTCTGTCTGACGGAGTGTGGATGTTAGCACAGTTGTAAGCAGTAAGTCATA
TTGGCATTCCACGTGACAGTGTTCCTAGCTCATGTACATAATGTCCAAAGCCCTGCCACACACCGGCTCC
CTGGGGTGGGCCAGGTTGGCTGTCTTCTCACAGCACAAATCTAGAAGGCCTTGCTGATAATTCTCTTTGG
GGCTCTGGCTGCATCCAGCGCAGAACAATCATGTGAGCTGTACACCGCACGGGTGGCCCTTCTCTGAGCT
CAGGGTCTGCCCCGGCACAAGCCTCAGTGTTTCCTGAGCTGCTAACAGGCCTTCATTCCTATTGTGAATG
TAATATGGTTTTGAATAGTTTTATAATACACGTCTAAGAATTAAGATTTTGTGGAAGTTTGAGGAAAAAG
GAAGACTAAAATTTCATCCAACAGATGAGCTGGTTTTGGTTAACTGATAGGCTGTAACAGCAGGGATGCC
AGCAGAAAGGAGCTATGGCTCATACATTTTCACCTACATTTTCCATAACTTTATAGTGTGGCCATCGTGA
CTAAATTAACCACAGTTTGGTATCTGAGTCTCAAACTGAAGATTATTTTTATAAATGAATTTTAAAAGAA
AAACCTTGGCTGTTTTAAAATCTCAAGAAAATGAACCTGCTGCCATGCATAATTTTTTGATGCTTTTGCA
CTAGGTATCTTGTAAATGTCACTGCATTTCTGATGAAGGGCGACTGACAGGTAGAGGTAGTATTGTGTGT
CTGAAATTGTTCAGCTCCTATGACGCACCATGGGCTGCCCTCATTTCCATATGCTTAGAAATAACTGGGC
AATCAAATTACCACTAATGTTTGGGAAATGAGTGAAGGCACATGCACAGTGTAACTCCTGAAAGCTCTGA
CAAACCACCCTCATTACCACCACTGATGACATCTCCATTTGATAAAAGGCATGCCAGTCGCATTTCACCA
TCATTAAGATACAGTAACATTTCCCATTAAATTGACAACGACACCTCAGAAATATTCCAGTAGTCATTTC
TAATGCATTGAAATTTATAGTTTAGTAAATGCCTTTAAATTACTTATACTGACGAAATAAACTTTACCAG
TTGACTAACGTAATGCATGTTAGTAGTTCATCTGTACTGCATGTAGAAGTGGGCCGCCAGAAAACCCTTA
CAGTCCAGCTGTTTTTAAGACTAAGAGCTGTAAAAATTGCAGTGTGTGAATCCCATTTATACAGTTTTCC
CTGAGACCACCAGAACGTTACACCACAGTTAGATAGGACCACCACTGCTATGGCTCCAGGCATACATACA
TTCCAGACTGGTTTCCTGGAAGGAAGCAAGAAAGAAGGAATACACCTGTGTGGCTTTATAAGCATGCACA
TAGGGTAGCATGCTTCTGTAAAATGATGATTAATTAGCATTTGACTTCCCACATAAGACACTGAGCCCAC
CACTCCATAAGTCACAGGTCACATTCACAAGTCAGTGATCTAGTAAATGTCACAGATTGGACCTCATTCC
TTCAGCCTCACAGTACTGTGCATAGTGTTTGGGCATTAGGACCCCTTTACCAGAACATCAGGATATAAAT
TTTCCAGCACATTAATGGGATTTGCCAAGTGTGTTAAGAGTTCAAGTGTATACCATGCCCAGTAAACAAC
CTGCAGGAAGTAGTGGGGAAAAAGGGCACGAGACAAGGTAGAAAGTATAGAAATAAAATTAGCATTGTTT
GGGAGACACCAAAAAAGACATGTGCAAGACTGGCTCTTCCCCCCACGCCCCAAGCACTCATACCAAGCTA
GGATTCCATAGGCTAGGGCTTTGGGCCAGGGAGCTGATGCTGCTGGTGTGACTTGGTTTAAAAGTCCTAG
CTGACACGGTTCAAGCTTCCTGTTCCTCCAGCCACCTTGTGCAGGACCGTTTGTCCTGCTTTCCTGCTGT
GTTGCTCTCTTAGTTTGACATTTGTTTATGGCTGACCCCAGAGTCTGATGCATCTCCTGAATCGATCTGA
ATGTCCCTCCTGACCCCTCCAGGTGTGAGCACCAGCCATTGGTCCCACAGACCTTGAGGTCAGAGTATGT
AAAAATGCTTGTAAATATTGTAACATACTCATTAATATTTGAAAGTCATTCTGTCATTGGCAATGGAAAT
TAATTCTCCCAAGATAAGCAAAAATTAAATAATTGATTTTGCACATTGACTTAATGACCTTAATTACTTG
ATTTCAAGTCTCAGCCCTTTAAAATTAAACCCAAAAGTTATTATACAGTCATTCTAAAAATGATGTTTTG
AAGAGATATGTGGTTAATACCGTGAACTCACGCCATGAAATCTGTAAGGTTTTTATTTTTCTAACTGTAC
TAATGGAGGACTAAACTTGAGGTATGAATGTAGGAGACATGGAAGTTTTTAAATTATGTTGCTATTTGTT
CAAATAAAACAGAAATTTTGCACATTGAAGGACCATGAAGAAATGTGTCCCACTGACTGGGCTCTGACCT
GGCTTCCCAAATGTAAGCAGAGAATGGCTGACATTCCAGGGAAAACGACAGTGCTGAGTGTGCTCCAGTG
AGTAGTATTTCAGCCAGGAGTGATGCCACATGCCTTTATTTCCAGCATTCCAGAAGTAGAAGCAGAAAAT
CTTTGGGATTTCAGGGCCAGCCTGGTCTACACAGTGTGACCTTGTCTCTCTCTCTCTCTCTTTTTTTTTA
AGGTATTTTATTTTAGAATTTTTGAAGGGGGAAATAAACTGGCTTTCATCATAAAAAAAAAAAAAAAAAA
AA
Notes:The probe template was PCR amplified from IMAGE:30535423 using vector (pYX-Asc) specific primers. Forward Primer - name:RZPD T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30535423 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:13196 same embryo
 EMAGE:13197 same embryo
 EurExpress:euxassay_017435 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS