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EMAGE:13738

Kdr kinase insert domain protein receptor ( MGI:96683)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:13738 EMAGE:13738 EMAGE:13738 EMAGE:13738 EMAGE:13738
"Pseudo-wholemount" of euxassay_019753. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_019753_01 euxassay_019753_02 euxassay_019753_03 euxassay_019753_04
EMAGE:13738 EMAGE:13738 EMAGE:13738 EMAGE:13738 EMAGE:13738
euxassay_019753_05 euxassay_019753_06 euxassay_019753_07 euxassay_019753_08 euxassay_019753_09
EMAGE:13738 EMAGE:13738 EMAGE:13738 EMAGE:13738 EMAGE:13738
euxassay_019753_10 euxassay_019753_11 euxassay_019753_12 euxassay_019753_13 euxassay_019753_14
EMAGE:13738 EMAGE:13738 EMAGE:13738 EMAGE:13738 EMAGE:13738
euxassay_019753_15 euxassay_019753_16 euxassay_019753_17 euxassay_019753_18 euxassay_019753_19
EMAGE:13738
euxassay_019753_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:13738Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
13738_wholemount_strong.wlz
13738_wholemount_moderate.wlz
13738_wholemount_weak.wlz
13738_wholemount_possible.wlz
13738_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:13738_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T56087
Entity Detected:Kdr, kinase insert domain protein receptor ( MGI:96683)
Sequence:sense strand is shown

>T56087
ATCTTTGGTGGAAGCCACAGTGGGCAGTCAAGTCCGAATCCCTGTGAAGTATCTCAGTTACCCAGCTCCT
GATATCAAATGGTACAGAAATGGAAGGCCCATTGAGTCCAACTACACAATGATTGTTGGCGATGAACTCA
CCATCATGGAAGTGACTGAAAGAGATGCAGGAAACTACACGGTCATCCTCACCAACCCCATTTCAATGGA
GAAACAGAGCCACATGGTCTCTCTGGTTGTGAATGTCCCACCCCAGATCGGTGAGAAAGCCTTGATCTCG
CCTATGGATTCCTACCAGTATGGGACCATGCAGACATTGACATGCACAGTCTACGCCAACCCTCCCCTGC
ACCACATCCAGTGGTACTGGCAGCTAGAAGAAGCCTGCTCCTACAGACCCGGCCAAACAAGCCCGTATGC
TTGTAAAGAATGGAGACACGTGGAGGATTTCCAGGGGGGAAACAAGATCGAAGTCACCAAAAACCAATAT
GCCCTGATTGAAGGAAAAAACAAAACTGTAAGTACGCTGGTCATCCAAGCTGCCAACGTGTCAGCGTTGT
ACAAATGTGAAGCCATCAACAAAGCGGGACGAGGAGAGAGGGTCATCTCCTTCCATGTGATCAGGGGTCC
TGAAATTACTGTGCAACCTGCTGCCCAGCCAACTGAGCAGGAGAGTGTGTCCCTGTTGTGCACTGCAGAC
AGAAATACGTTTGAGAACCTCACGTGGTACAAGCTTGGCTCACAGGCAACATCGGTCCACATGGGCGAAT
CACTCACACCAGTTTGCAAGAACTTGGATGCTCTTTGGAAACTGAATGGCACCATGTTTTCTAACAGCAC
AAATGACATCTTGATTGTGGCATTTCAGAATGCCTCTCTGCAGGACCAAGGCGACTATGTTTGCTCTGCT
CAAGATAAGAAGACCAAGAAAAGACATTGCCTGGTCAAACAGCTCATCATCCTAGAGCGCATG
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:ATCTTTGGTGGAAGCCACAG; Reverse Primer - name:unspecified, sequence:CATGCGCTCTAGGATGATGA. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:13737 same embryo
 EMAGE:13739 same embryo
 EurExpress:euxassay_019753 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS