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EMAGE:14093

Pcgf2 polycomb group ring finger 2 ( MGI:99161)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14093 EMAGE:14093 EMAGE:14093 EMAGE:14093 EMAGE:14093
"Pseudo-wholemount" of euxassay_001736. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_001736_01 euxassay_001736_02 euxassay_001736_03 euxassay_001736_04
EMAGE:14093 EMAGE:14093 EMAGE:14093 EMAGE:14093 EMAGE:14093
euxassay_001736_05 euxassay_001736_06 euxassay_001736_07 euxassay_001736_08 euxassay_001736_09
EMAGE:14093 EMAGE:14093 EMAGE:14093 EMAGE:14093 EMAGE:14093
euxassay_001736_10 euxassay_001736_11 euxassay_001736_12 euxassay_001736_13 euxassay_001736_14
EMAGE:14093 EMAGE:14093 EMAGE:14093 EMAGE:14093 EMAGE:14093
euxassay_001736_15 euxassay_001736_16 euxassay_001736_17 euxassay_001736_18 euxassay_001736_19
EMAGE:14093
euxassay_001736_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14093Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14093_wholemount_strong.wlz
14093_wholemount_moderate.wlz
14093_wholemount_weak.wlz
14093_wholemount_possible.wlz
14093_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14093_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4103
Entity Detected:Pcgf2, polycomb group ring finger 2 ( MGI:99161)
Sequence:sense strand is shown

>T4103
GTCTCTCTCTCTTTTTTTTTCCTTTCCTCCCTTCCAAGATGGCCGAAGTGGATTCCCCCTCTTAACGATT
TGGAGTCTCCCTCGACCACCTCCTCTTTGTGCAGCAGCCCCCTGCTAAGACCCTGCTTGCGAGGCAGGAA
ACAGCCTCCAGGATCCAGTCCGGCTGTCGCGTCGCCTGATCCTGTTCAAGTTGAAGGCTTGGGAGGGTGA
CACTTCCCAAATCTCCTCAGTCCTGACCCCGGCATCATGCATCGGACCACACGGATTAAAATCACGGAGC
TGAACCCTCACCTCATGTGTGCCCTCTGTGGGGGCTATTTTATTGATGCCACCACCATTGTGGAATGCTT
ACATTCCTTCTGCAAAACCTGCATCGTACGCTACTTGGAGACCAACAAATACTGCCCCATGTGTGACGTC
CAGGTCCATAAAACTCGACCACTGCTGAGCATCAGATCAGACAAAACCCTCCAGGACATTGTCTACAAGT
TGGTGCCTGGGCTTTTTAAAGATGAAATGAAACGGCGACGGGACTTCTATGCAGCATACCCCCTGACAGA
GGTCCCCAACGGCTCCAACGAGGACCGAGGCGAGGTCCTGGAACAGGAGAAGGGGGCTCTGGGTGACGAC
GAGATTGTCAGTCTTTCCATTGAGTTCTACGAAGGCGTCAGGGACCGAGAGGAGAAGAAGAACCTCACGG
AGAATGGAGATGGGGACAAGGAGAAGACAGGAGTGCGATTCCTGCGGTGCCCAGCAGCCATGACCGTCAT
GCACCTGGCAAAGTTCCTCCGCAACAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGATCCTCTATGAA
GATGAGCCCCTGAAGGAATACTACACCTTAATGGACATTGCGTACATCTACCCCTGGCGAAGGAATGGGC
CTCTCCCCCTCAAGTACCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTGCCCACGGTGCCAACCCCCTC
AGAAGGCACCAACACCAGCGGGGCATCAGAGTGTGAGTCAGTCAGCGACAAGGCTCCCAGCCCTGCCACC
CTTCCGGCCACCTCCTCCTCCTTGCCCAGCCCTGCGACCCCATCCCATGGCTCTCCCAGCTCCCACGGCC
CCCCAGCTACCCATCCTACTTCCCCCACTCCACCTTCAACTGCCGCTGGGACCACCACAGCTACCAATGG
GGGCACTTCGAACTGCCTGCAAACGCCATCCTCCACCAGCAGGGGGCGCAAGATGACTGTTAATGGCGCT
CCTTGCCCCCCTTGAGGAAAGGGACCCTCTCCTTCCGCAGCCATCTTTTCCCTCCTTTTTACTTTTTCTG
GGCCCCCTTTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAAT
AAATCTATATATATATAAATATATATATGTACATAGGAAAAACCAAATATACATACTTATTTTCAAAAAA
AAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4458285 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4458285 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14094 same embryo
 EMAGE:14090 same embryo
 EMAGE:14092 same embryo
 EMAGE:14091 same embryo
 EurExpress:euxassay_001736 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS