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EMAGE:14095

Gtpbp5 GTP binding protein 5 ( MGI:106565)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14095 EMAGE:14095 EMAGE:14095 EMAGE:14095 EMAGE:14095
"Pseudo-wholemount" of euxassay_001802. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_001802_01 euxassay_001802_02 euxassay_001802_03 euxassay_001802_04

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14095Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14095_wholemount_strong.wlz
14095_wholemount_moderate.wlz
14095_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14095_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4154
Entity Detected:Gtpbp5, GTP binding protein 5 ( MGI:106565)
Sequence:sense strand is shown

>T4154
GGAACCAGTCGAGCGAGCGGAGGTTTGCATGTGTCTGGCTCCCTGGCTGGCCTTGAACTTGCTAAGTAGT
AGAAGATGACCTTGAACTTCTGACCTTCCTACCTCCACCTCCTGAGTCTAGCCGCCGGTGTGCCAGCAGG
TGCCCAGAGCAGAGCCACCCACCACGTTCCTACAACACTCTTTCCTCCATGCAGCAGTTCAAGTCCTTGG
AAATTAGAAGGATGGGAGCTGCGTGAGGAACAGAGTGCTGAGACCACACAGACACTGCTCATTGTGTTCA
CAGAAGGACAGACGCCACGGTGCACCCGTGTGGGCTGGCCTGGCCTTGCCCGGCCTTTCCACTTTCAGGA
CCATGGTATCTACCAGACTTGTCTTGGCAAGGACTTGCACTGTGTTTGAGGGTGTTTTGAAATGGGCTCC
ATCCACACGTGCTGTCCTCAGGCCTAGCCACCTTCTTCTACAAGCATCATGCAGATTGCTCTCTGTGGGC
ATCGTAGACCACGCTAAGCACCGGGAGCCTTCTGGGAAGAAGGTTCTGTCAGAGAAGAAACTGAAAAGGC
ATTTCGTGGATCACCGGAGAGTGCTGGTCCGTGGAGGAAGCGGGGGCTCTGGCATGAGCTGCTTCCACAG
TGAGCCCCGCAAGGAGTTTGGAGGCCCTGATGGTGGAGATGGAGGAAATGGTGGACACATCATCCTGAGA
GTTGACCAGCAAGTCAAGTCCTTGTCCTCAGTCTTATCCCAGTATCAGGGCTTCAGTGGAGAAGACGGTG
GCAGTAAAAACTGCTCTGGACGAGGTGGTGCCACCCTCTACATTCAGGTCCCTGTGGGTACCTTGGTGAA
AGAAGGAGACAAGATCGTGGCTGACCTCTCTAACCTGGGAGACGAGTACGTGGCTGCTCTCGGGGGTGCA
GGAGGAAAAGGCAATCGTTTCTTCCTGGCCAACGACAACCGTGCCCCTGTAACTTGCACCCCTGGACAAC
CGGGTCAGGAGCGGGTCCTCTACTTGGAACTCAAGACAATGGCTCACGCTGGGATGGTATGCCCCTGACA
GTGCCACACCCTGAGGGTTGGCTTCCCAAATGCTGGGAAATCCTCTCTCCTTCGAGCCATTTCAAATGCA
AAACCTGCTGTAGCTTCCTACCCGTTCACCACCTTGAACCCTCACGTGGGGATCGTTCACTATGAAGGCC
ACCAACAGGTAGCAGTGGCAGACATCCCAGGCATCATCCGAGGTGCACACCAGAACAAGGGCCTGGGCCT
CAGCTTCCTCAGGCACATCGAGCGTTGTCGCTTCTTCCTGTTTGTGGTAGATCTTACCTTGCCTGAGCCG
TGGACTCAGGTTGATGATTTAAAATATGAACTAGAGAAGTTTGAAGAAGGCCTGTCAGAGAGGTCCCACG
TGATCATTGCAAATAAGATCGATCTCCCGCAAGCCAGAGCCCGCCTGCCTCAGCTGCAGGCCCGCCTCGG
ACAGGAGGCCATAGGCCTGTCGGCGCTGACTGGGGAGAACCTGGAGCAGCTGCTTCTGCACCTGAAGGAG
CTGCATGATGCCCACATAGAGGCCGAGCTGGAGCAGGGCCGCCAGCCTCTCAGGTGGTAGTGGGCACAGG
GCCGTGTGCCCCAGGGCCAGCGTGGAACGGGGGTGGGCCATCAATCACAGGAAGCAAAAGCAACCTTTTG
TAAACTGCGGGCCCTTTGAACTCCCGAGACTAAGTACTTGCAAATATAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4483063 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4483063 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14096 same embryo
 EMAGE:14098 same embryo
 EMAGE:14097 same embryo
 EurExpress:euxassay_001802 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS