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EMAGE:14278

Ftl1 ferritin light chain 1 ( MGI:95589)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14278 EMAGE:14278 EMAGE:14278 EMAGE:14278 EMAGE:14278
"Pseudo-wholemount" of euxassay_004105. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004105_01 euxassay_004105_02 euxassay_004105_03 euxassay_004105_04
EMAGE:14278 EMAGE:14278 EMAGE:14278 EMAGE:14278 EMAGE:14278
euxassay_004105_05 euxassay_004105_06 euxassay_004105_07 euxassay_004105_08 euxassay_004105_09
EMAGE:14278 EMAGE:14278 EMAGE:14278 EMAGE:14278 EMAGE:14278
euxassay_004105_10 euxassay_004105_11 euxassay_004105_12 euxassay_004105_13 euxassay_004105_14
EMAGE:14278 EMAGE:14278 EMAGE:14278 EMAGE:14278 EMAGE:14278
euxassay_004105_15 euxassay_004105_16 euxassay_004105_17 euxassay_004105_18 euxassay_004105_19
EMAGE:14278 EMAGE:14278 EMAGE:14278 EMAGE:14278 EMAGE:14278
euxassay_004105_20 euxassay_004105_21 euxassay_004105_22 euxassay_004105_23 euxassay_004105_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14278Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14278_wholemount_strong.wlz
14278_wholemount_moderate.wlz
14278_wholemount_weak.wlz
14278_wholemount_possible.wlz
14278_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14278_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5599
Entity Detected:Ftl1, ferritin light chain 1 ( MGI:95589)
Sequence:sense strand is shown

>T5599
CGTGGATCTGTGTCTTGCTTCAACAGTGTTTGAACGGAACAGACCCGGGGATTCCCACTGTACTCGCTTC
CAGCCGCCTTTACAAGTCTCTCCAGTCGCAGCCTCCGGGACCATCTCCTCGCTGCCTTCAGCTCCTAGGA
CCAGTCTGCACCGTCTCTTCGCGGTTAGCTCCTACTCCGGATCAGCCATGACCTCTCAGATTCGTCAGAA
TTATTCCACCGAGGTGGAAGCTGCCGTGAACCGCCTGGTCAACTTGCACCTGCGGGCCTCCTACACCTAC
CTCTCTCTGGGCTTCTTTTTTGATCGGGATGACGTGGCTCTGGAGGGCGTAGGCCACTTCTTCCGCGAAT
TGGCCGAGGAGAAGCGCGAGGGCGCGGAGCGTCTCCTCGAGTTTCAGAACGATCGCGGGGGCCGTGCACT
CTTCCAGGATGTGCAGAAGCCATCTCAAGATGAATGGGGTAAAACCCAGGAGGCCATGGAAGCTGCCTTG
GCCATGGAGAAGAACCTGAATCAGGCCCTCTTGGATCTGCATGCCCTGGGTTCTGCCCGCGCGGACCCTC
ATCTCTGTGACTTCCTGGAAAGCCACTATCTGGATAAGGAGGTGAAACTCATCAAGAAGATGGGCAACCA
TCTGACCAACCTCCGCAGGGTGGCGGGGCCACAACCAGCGCAGACTGGCGCGCCCCAGGGGTCTCTGGGC
GAGTATCTCTTTGAGCGCCTCACTCTCAAGCACGACTAGGAGGCCTCTGTACCTTCCAAGGGGCTCCCCC
CTCTGCTCTGCACCAGCCCGCCCTGGGACCTCCACCTGAATGAACCTCTCAAGCCACTAGGCAGCTTTGT
AACCGCCCTGGAGCCTCTGTCAAGTCTTGGACCAAGTAAAAATAAAGCTTTTTGAGACAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6489467 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6489467 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14279 same embryo
 EMAGE:14282 same embryo
 EMAGE:14281 same embryo
 EMAGE:14280 same embryo
 EMAGE:14283 same embryo
 EurExpress:euxassay_004105 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS