Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:14293

Vash2 vasohibin 2 ( MGI:2444826)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14293 EMAGE:14293 EMAGE:14293 EMAGE:14293 EMAGE:14293
"Pseudo-wholemount" of euxassay_004027. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004027_01 euxassay_004027_02 euxassay_004027_03 euxassay_004027_04
EMAGE:14293 EMAGE:14293 EMAGE:14293 EMAGE:14293 EMAGE:14293
euxassay_004027_05 euxassay_004027_06 euxassay_004027_07 euxassay_004027_08 euxassay_004027_09
EMAGE:14293 EMAGE:14293 EMAGE:14293 EMAGE:14293 EMAGE:14293
euxassay_004027_10 euxassay_004027_11 euxassay_004027_12 euxassay_004027_13 euxassay_004027_14
EMAGE:14293 EMAGE:14293 EMAGE:14293 EMAGE:14293 EMAGE:14293
euxassay_004027_15 euxassay_004027_16 euxassay_004027_17 euxassay_004027_18 euxassay_004027_19

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14293Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14293_wholemount_strong.wlz
14293_wholemount_moderate.wlz
14293_wholemount_weak.wlz
14293_wholemount_possible.wlz
14293_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14293_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4987
Entity Detected:Vash2, vasohibin 2 ( MGI:2444826)
Sequence:sense strand is shown

>T4987
ATGGAATGAGGCGACGACCGCCTCAACCCCAACAGCCTTCTGCAGCAATGAGGCCGGCCCGAGGCCCGGT
CGGTGAGCGGGGTTCCCTTCGTGTGTCCTACGGCCGCGAGAGTTAAAGGCCACCCCAACCTCCCGCGGGG
CCCTGATCCCCGGCGTGCCGGCGTCCTCCGCCCCCTTGCCGTGTGCCCCTCATCATGACCGGCTCTGCCG
CCGACACTCACCGCTGCCCCCACCCCAAAATCACCAAAGGCACCCGATCCCGGAGCAGCCACGCGCGGCC
CGTGAGCCTCGCCACCAGCGGGGGCTCCGAGGAGGAGGACAAAGACGGCGGGGTGCTGTTCCACGTGAAC
AAGAGCGGGTTCCCGATCGATAGCCACACCTGGGAGCGGATGTGGCTGCACGTTGCCAAGGTCCACCCCA
GAGGGGGAGAGATGGTAGGCGCCATCAGAAACGCTGCCTTCCTGGCTAAGCCTTCAATTCCCCAGGTCCC
AAACTACAGGTTGTCCATGACGATCCCAGACTGGCTCCAGGCCATCCAGAATTACATGAAGACTCTACAA
TACAACCACACAGGGACCCAGTTCTTTGAAATCAGGAAAATGCGACCTCTGAGCGGGTTAATGGAGACAG
CGAAGGAGATGACCCGAGAATCCTTGCCTATCAAATGCCTGGAGGCAGTCATCCTGGGCATCTATCTCAC
CAATGGGCAGCCTTCCATTGAGCGGTTCCCTATCAGCTTTAAAACCTACTTCTCAGGAAACTACTTTCAC
CATGTCGTGCTGGGGATTTACTGCAACGGTTACTACGGTTCACTGGGCATGAGCCGAAGGGCTGAGCTGA
TGGACAAGCCGCTGACCTTTCGGACTCTGAGTGACCTTGTCTTTGACTTCGAAGATTCCTATAAGAAATA
CCTGCACACGGTTAAGAAGGTCAAGATCGGGCTGTACGTCCCCCACGAGCCGCACAGCTTCCAGCCCATC
GAGTGGAAGCAACTTGTCCTCAACGTCTCCAAGATGCTGAGGGCTGACATCAGGAAGGAGCTGGAGAAGT
ACGCCAGGGACATGCGGATGAAGATCTTGAAACCTGCAAGTGCCCACTCTCCAACCCAAGTGAGAAGCCG
GGGCAAGTCCCTGTCTCCACGAAGGAGACAAGCAAGCCCTCCAAGGAGGCTCGGCAGGCGAGACAAATCG
CCTGCTCTGACCGAGAAGAAGGTGGCTGACCTCGGCACTCTGAACGAAGTGGGCTATCAGATCCGGATCT
AGCCGAGCCAGGCCGGCCAGGCTTCTATGGTGCTCTTCTCTGCACTTTACCCAGCAGCTTCAGGAGGAAC
TGCAACTTGTGGAGTTTTGATTTTGAAGGATTTACCTGGAGATGGAATCTGAGTGGGTTTTGAAAACTCA
CCGGGCAGCAGGCATGACTGGGCTGAAGTGATGGGCAAAGCCCTGGGTTGACTGACTCCCTCACTCAGGA
TCCTAAGAACAATGCTGACTGCAGTTTTCTACTTTTCTCCATTTGCCGACTCTTCTGCTTGCTTTGGACA
TTATGCCTCAGCTCTAGAAACCGTTTATGGAGTTCCTCCCACTTTTTGGTACAGCAGGCAACTCAGCCAG
TATTACTGTCTCCTCAGCAATAACAAGCAAAGATGGGTGGGTTTTTTTTAAGCAGTTGATATTACCTCAA
CATTTTGGCATCAGATATGCAATCTTAATGAGTTTTTTATATTCTATTTGTATTGTTTCCTATAGGGATC
TCGATGGTTTGGTGGGGGTTTTTTTGTTTTTTTTTCTGGTTCACATGTGAGATGAGATTTAAGTTGTTAT
ATGCAAATGCTTTAGAAGCACTCAAATTCTGGCAATAAGGGAATATAATCCGCTTTGGGATGTTGGCGTC
ACTTTTCTTAAAGCATCTGCCGACAGGTTTCCTTCTAACAAGCACGCTGAGGAGCTCGGGTCCATGCAGT
TGCTGACATTTAAGCCTTTTCTGAGGCAAGCAAAAGGCACAAGAGATCATCTGCTCCCAAAAAAACGCAG
CAGTGCTGAGACGTCCCAGACAGCCTCGGTTCCTAGTGGCTCCTTGTTGTTAATGTGTTCTGCTGTCTCA
CATGAAGGCAAACATGATGGTGGACTGTTTCCCAGGGGCTTGTCTTTAGGTACTACGTCACGGCATCAGG
AGGTGCTGGGGGAAACCAGGACCTCGTGGATCGAGCCTGTCGTGAAGGGAAAGCGTTCCAGCACAGTGTC
GTGCCGCCGTGTCAGTGTCACCCGTGCCGCCGTGTCACCCAGGCCCTGAAGCACAGCCCGCCTGCCTGTG
GCGACTGCAGCGCAGCTTCTGCTTGCAGACCATGGAGAAGGAAACACAGTTTCAAGTCATTGATCTTAGT
GCAGTCACCATGCCAACTCAGGACAGAGGACCGGCTTCAGCTGGATTGCTAGCCCCGAGAGCTCAGCATG
CCACCCTCTGGCTGTGACTGCGGCAGAGCTCCAAGTCAACCGTCTGCTTATGGAGTCTTTGCCAGGAAAC
CTAGGGCCATATGGAGGGCAAAACCTCACTCCACCCTTAAACCAGTATTATTAATGAAAAGTCGTTTTCT
TGGAAAAGCTTAGTGTCCTTTAGCGGTCAGGACCCGGAAACTAAAACCGAGTGTAAACTTCAAATTCTGA
ACTCAATGGCTTTCTTCAAGAATCCTATGACTGGAGTTCAAAGTGAGTTATGGGGCCTCCACATGTCCTC
ACGAGCTGCTACCTGTTGTCAGCCTCAGGGCAGTGTGCATTTAAATGTTCCAAGGAGCAATCTGTTAAAC
TAAAGCCACCGGGCAAAGTGCCTGCAACTGCCTGTGTTCAAGGACAGCTCCCAGGAACAGAGCGCCAAAC
AGCGGGACAACCTTGTTGTGTGGCAAGGGAAAGAAGAGCAGCTGGCTGTGACACTGCCCTTGTAATCTCT
CCCACAACTACTTTCTGATTTTTAGGTTCATTTTTCAAGGCAGAGTTAGTCACAGAAACATCTAAAAATG
TTTGTCTTTGTCACTCAATTTTACTGCCTGTAGTTAAACTAACTCCCAAAAAACCAGAAGGAAGCCCCGA
AACACCTACATTCTAATGCAATAGTTTATTGGGATAAAAAGGCGGCAAAAATGAATGCAGCACGTCTGAC
CTCTCAGACTGACCTTTCAGCCTGGCTGTGATGAAGATGAAAACTGACTTGACAGGAACAATTATCCTAT
GCACCATGACAAGATGCCCTGAGCTGACAAGTTTCAAGCTGACTGCTATTGGTTGTGAGAGGTGGCCTGG
GTGTTTTCTGCACACGTGGGAGCCGTGAGCACACCCCTTTCCTTGAGTCAGCTGTTTCATGGATGTCCTC
AGCAGACATGGGTAAGCAAAGGGAAGCCTTTGCAGCCCTCCAGCTCACTATACAAGGCTTTCCTAGGCTA
GACTTTTATGTACAACCTTGTACAGTTTTTTTGACATACACTTCAGATTCTTGTTTATTCTCTTAGACTT
TGATCTGGCCAATACATTTTTAAAAAATCTTTCTGAAGAACCATAATTGTTTTGGTGGGTATTTTTCTAA
GTATGTGAAGACTTGATGGTATTCTACAGAACACCACAAGTGCATGCTTCAGGCTCGACGACTCTCTCTC
ATCATGTGTCCACACAGCATGGAACTGTAATAAAACCGTTCTGGAAACTGAAGGACAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA
Notes:The probe template was PCR amplified from IMAGE:5149750 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5149750 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14295 same embryo
 EMAGE:14294 same embryo
 EurExpress:euxassay_004027 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS