EMAGE mouse gene expression spatial database

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EMAGE:14309

Maged2 melanoma antigen, family D, 2 ( MGI:1933391)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


"Pseudo-wholemount" of euxassay_004156. This image has been made by aligning and collapsing the constitutent sections. Information about the method.	euxassay_004156_01	euxassay_004156_02	euxassay_004156_03	euxassay_004156_04

euxassay_004156_05	euxassay_004156_06	euxassay_004156_07	euxassay_004156_08	euxassay_004156_09

euxassay_004156_10	euxassay_004156_11	euxassay_004156_12	euxassay_004156_13	euxassay_004156_14

euxassay_004156_15	euxassay_004156_16	euxassay_004156_17	euxassay_004156_18	euxassay_004156_19

euxassay_004156_20

View assay images:
Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

14309_wholemount_strong.wlz

14309_wholemount_moderate.wlz

14309_wholemount_weak.wlz

14309_wholemount_possible.wlz

14309_wholemount_not_detected.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:14309_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Annotation Validation:

spatial mapping by EMAGE editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T5608
Entity Detected:	Maged2, melanoma antigen, family D, 2 ( MGI:1933391)
Sequence:	sense strand is shown >T5608 CTCCAACATTTTACTCCCCAGGGGGCTTGGAGAGAGTGGACACACTCGGGAATTGTAGGAGGACGAGCTT TGCTAGGTGAACTTGAGACATGTCTGACACAAGCGAGAGTGGTGCAGATCCAGCTCGCTCTCAGGGCAAA GCTTCAGAAAAGGACAGCGGCTCCGTGATGCAGGACCTGTTGACCGTGACCCAGAACTTGGAGGTCTCAG AAACACCAAAGGCAGAAAAGGCACCAGAGGTTTCAGAGGCTGCAAAGGCTCCAAAAGCCTCTGGGAACCC AAAGGCGACAGAGGTCTCAAAGGCCCCAGAGGCGTCTGAGGCAGCTGCCACCCAGGCCTCACCTACCACA CAGCTGAGTGAGACCCAAGTTCTGGCAACTGAAAACAAGAGTCCAGCAGCTGACACCAAGACGCAGAAGT CTGACCTGCAGGCTATGACAATGCCTACAACCCCGACCAAAAAGGTCAGCTGTGGTACCGATCCAAAGGT CAATACAAAGGCTCCGGAGACTGAGGCTCCTGCCTCTCAGGCTGGGACAGATGAACCAGAGCCTGAGGGT ACAGCTGTCCAGGTTCAGGAGAACCAGGATACTCGGCCCAAGGTCAAAGCCAAGAATACCCAAAAGGGGA AACACCCGGATGGAGAAGAGGATGGCAACAGTGACCAGAGTCAGGCTTCAGAAGCCACAGGTGGTCGAAG GGTCTCAAAGGCCCTAATGGCCTCCATGGCTCGCAGAGCTTCAAGGGGACCCATAGCCTTTTGGGCCCGC AGGGCATCAAGGACTCGGTTGGCTGCCTGGGCTCGGAGAGCTTTGCTCTCCCTGAGGTCACCTAGAGCTC GCAGAGGCAAGGCCCGAAGAAGAGCTGCGAAGCTACAGTCATCCCAGGAACCTGAGGCACCCCCACCCAG AGATGTGGCCCTTTTACAAGGAAGGGCAAATGACTTGGTGAAGTACCTGTTGGCTAAAGACCAGACAAAG ATTCCCATCAGACGCTCAGATATGCTGAAGGACATCATCAAAGAATATACTGATGTATACCCTGAAATCA TTGAACGAGCAGGCTATTCCTTGGAGAAGGTATTTGGAATCCAATTGAAAGAAATTGACAAGAATGACCA CTTGTATATTCTTCTCAGTACCTTAGAGCCAACTGATGCAGGCATATTGGGAACGACCAAGGACTCACCT AAGCTGGGCCTCCTCATGGTGCTTCTTAGCATCATCTTCATGAATGGAAATCGGTCCAGTGAGGCTGTCA TCTGGGAGGTGCTGCGCAAGTTGGGGCTGCGCCCTGGGATTCATCACTCACTCTTTGGAGATGTGAAGAA ACTCATTACTGATGAGTTTGTGAAGCAGAAGTACCTGGACTATGCCAGAGTACCCAATAGCAATCCTCCT GAGTACGAGTTCTTCTGGGGCCTACGCTCTTACTATGAGACCAGCAAGATGAAAGTTCTCAAGTTTGCTT GTAAGGTGCAAAAGAAGGATCCCAAGGAATGGGCAGCTCAGTACCGAGAGGCAATGGAAGCAGATTTGAA GGCTGCAGCTGAGGCTGCTGCCGAAGCCAAGGCGAGGGCTGAGATTAGAGCTCAGATGGGCATTGGGCTT GGCTCTGAGAATGCCGCTGGGCCCTGCAACTGGGACGAAGCTGATATTGGACCCTGGGCAAAGGCCCGGA TCCAGGCAGGAGCTGAAACTAAAGCCAAAGCCCAAGGAAGTGGTGGTGCCAATGCCAGTGCTGGTGCCGG TGCCAGTACTGGTACCAGTGTTGGTGCCAGTGGCAGTGCCAGTGCTGGTGCCAGTGCTGGTGCCAGTGGT GGCTTCAGTAACAACTCCAGCCTGACTGCCAGTCTCACATTTGGGCTCTTCGCTGGCCTTAGTGGAGCTG GGGCCAGTACCAACAGCAGCTCTGGTGCCTGTGGTTTCTCCTACAAGTGAGATACAGATTGCTAATAATC ACAGCGTCTTCTTCTCAAGCCAGGGTGCACTCTCAGAAACGTACTCAATGCAGCACTCCAGGCAGCCACT ATCAAATCAACTGAAGTCGACACTCTATATTAAATCTATTTGCCATTTCTGAAAAAAAAAAAAAAAAAAA AAAAAA
Notes:	The probe template was PCR amplified from IMAGE:6491028 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6491028 which was retrieved directly from NCBI.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EMAGE:14307 same embryo
	EMAGE:14304 same embryo
	EMAGE:14308 same embryo
	EMAGE:14306 same embryo
	EMAGE:14305 same embryo
	EurExpress:euxassay_004156 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source