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EMAGE:14367

Pbx2 pre B-cell leukemia transcription factor 2 ( MGI:1341793)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14367 EMAGE:14367 EMAGE:14367 EMAGE:14367 EMAGE:14367
"Pseudo-wholemount" of euxassay_004186. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004186_01 euxassay_004186_02 euxassay_004186_03 euxassay_004186_04
EMAGE:14367 EMAGE:14367 EMAGE:14367 EMAGE:14367 EMAGE:14367
euxassay_004186_05 euxassay_004186_06 euxassay_004186_07 euxassay_004186_08 euxassay_004186_09
EMAGE:14367 EMAGE:14367 EMAGE:14367 EMAGE:14367 EMAGE:14367
euxassay_004186_10 euxassay_004186_11 euxassay_004186_12 euxassay_004186_13 euxassay_004186_14
EMAGE:14367 EMAGE:14367 EMAGE:14367 EMAGE:14367 EMAGE:14367
euxassay_004186_15 euxassay_004186_16 euxassay_004186_17 euxassay_004186_18 euxassay_004186_19
EMAGE:14367 EMAGE:14367 EMAGE:14367
euxassay_004186_20 euxassay_004186_21 euxassay_004186_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14367Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14367_wholemount_strong.wlz
14367_wholemount_moderate.wlz
14367_wholemount_weak.wlz
14367_wholemount_possible.wlz
14367_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14367_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7872
Entity Detected:Pbx2, pre B-cell leukemia transcription factor 2 ( MGI:1341793)
Sequence:sense strand is shown

>T7872
CCCCCGCTTGGGCCTCCTCTCTCTCTCTCTCCGGCTCCATTTTCTCCGCCGCCGGGGGCCGGGGTCTCCT
GTGGGGGTGCCCAGGCGGCACCCCGGGTCTCCCCTTCAGTGCCGGGGTGAACCCCCGAGGGGAGCCGGGA
GGCGGGTTGCCGGGCGGGGTTGGGGCGGAGGGAGCAGCGGCCCCAGCGAGTTTGGGGGGGAAGTCACCCG
GCGGGGGGAGGGGCGAGCAGGGAGGGGGCCTCAGGCCCCCCCCCCAGCTATGGACGAGCGGCTGCTGGGG
CCGCCTCCTCCGGGCGGGGGCCGTGGGGGTCTGGGGCTGGTAGGTGCGGAGCCCGGGGGCCCTGGCGAGC
CACCCGGTGGCGGAGACCCCGGTGGGGGAAGTGGGGGGGTCCCGGGAGGCCGAGGGAAGCAAGACATCGG
GGACATTCTGCAACAGATAATGACCATCACGGACCAGAGCCTGGACGAGGCCCAGGCCAAGAAACACGCC
CTAAACTGTCACCGAATGAAACCTGCCCTGTTTAGTGTCCTGTGTGAAATCAAGGAGAAAACTGGCCTTA
GCATTCGGAGCTCCCAAGAGGAGGAGCCCGTGGACCCACAGCTGATGCGCCTGGACAACATGCTTCTGGC
AGAAGGTGTGGCTGGACCCGAGAAAGGGGGCGGCTCCGCAGCAGCTGCTGCAGCTGCCGCAGCCTCCGGT
GGTGGCGTATCCCCGGACAACTCCATCGAACACTCAGACTATCGCAGCAAGCTTGCCCAGATCCGCCACA
TCTACCACTCAGAGCTGGAGAAGTATGAGCAGGCATGCAATGAGTTCACAACTCACGTCATGAACCTGCT
GAGGGAGCAGAGCCGCACTCGCCCGGTCGCCCCCAAGGAGATGGAGCGCATGGTTAGCATCATCCATCGA
AAGTTCAGCGCCATTCAGATGCAGCTGAAGCAAAGCACCTGTGAGGCCGTCATGATCCTGCGTTCTCGCT
TCCTGGATGCCAGACGGAAACGCCGGAACTTCAGCAAACAGGCCACTGAGGTCCTGAATGAGTATTTCTA
CTCCCACCTGAGCAACCCTTACCCTAGTGAGGAGGCCAAAGAGGAGCTTGCCAAGAAGTGTGGCATCACC
GTCTCTCAGGTTTCCAACTGGTTCGGTAACAAGCGAATTCGCTACAAGAAGAATATTGGGAAGTTCCAAG
AGGAGGCGAACATCTATGCTGTGAAGACAGCCGTGTCAGTTGCCCAGGGGGGCCACAGCCGCACCAGCTC
TCCAACGCCCCCTTCCTCCGCAGGCTCTGGCGGCTCTTTCAATCTCTCAGGATCCGGAGACATGTTTCTG
GGGATGCCCGGGCTCAATGGCGATTCCTACCCTGCTTCCCAGGTGGAATCACTCCGACACTCGATGGGGC
CGGGGAGCTACGGGGATAACATTGGGGGAGGTCAGATATACAGTCCTCGAGAAATTCGGGCCAATGGTGG
CTGGCAGGAGGCTGTGACCCCGTCCTCGGTGACATCCCCGACAGAGGGACCAGGAAGTGTTCACTCTGAC
ACCTCCAACTGACCTTGCCCCTCAAGGTCGCGGGGCTAGGGGCTTCCACCAGGCAACTCTTGAGGACTCT
GGGCATCTAGAGGACAAACCCCACAGAAGCACAAAACAGAGGGCGATTGGGGTTGTGCCCTCCCCGACCA
GACGCTTGGTGCTGGGGTGCTGACAACATGGCAGGGAGAGTGGGGTGTCCCCATTTCTTCTTTCTTTTTT
TCGTCTCACCTCTCACCAAAACCAGATACCTATTTCTCAGATGTCTCTCTTAAATCTACAACCTAACACC
AGTTGTGTTTGTCTTGGACTCCTCCTACTTCTGTTCCCCACCCCACTTATATACTCTGGAATCTGGAGAT
GTCAGCCCTGCCCGACCCAGAGATGCCAAAAATGGGGACTCTTGGATAGAGGCCCTGGGCCAACACCCCC
TCCCCCATGCACCCCCACCTCCTGCCCCTCCAGACGGCTTTATTACCTCATACGCAGCTCATCTTAAACC
AATAGAACCGCTCGGTGGACAAGAGTGTCTGACTCGGATATCTACCTCGGAGGGAGTTTCTGCTACTTTA
GAAAACTGTTGACTAGGCTTTGGAGTTGGACTTTTTGTTTTGTTTGTTTGTTTTTTAAGAAAAGAAACCC
TGAATCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6505014 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6505014 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14368 same embryo
 EMAGE:14365 same embryo
 EMAGE:14363 same embryo
 EMAGE:14364 same embryo
 EMAGE:14366 same embryo
 EurExpress:euxassay_004186 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS