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EMAGE:14470

2310044H10Rik RIKEN cDNA 2310044H10 gene ( MGI:1916933)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14470 EMAGE:14470 EMAGE:14470 EMAGE:14470 EMAGE:14470
"Pseudo-wholemount" of euxassay_004293. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004293_01 euxassay_004293_02 euxassay_004293_03 euxassay_004293_04
EMAGE:14470 EMAGE:14470 EMAGE:14470 EMAGE:14470 EMAGE:14470
euxassay_004293_05 euxassay_004293_06 euxassay_004293_07 euxassay_004293_08 euxassay_004293_09
EMAGE:14470 EMAGE:14470 EMAGE:14470 EMAGE:14470 EMAGE:14470
euxassay_004293_10 euxassay_004293_11 euxassay_004293_12 euxassay_004293_13 euxassay_004293_14
EMAGE:14470 EMAGE:14470 EMAGE:14470 EMAGE:14470 EMAGE:14470
euxassay_004293_15 euxassay_004293_16 euxassay_004293_17 euxassay_004293_18 euxassay_004293_19
EMAGE:14470 EMAGE:14470 EMAGE:14470
euxassay_004293_20 euxassay_004293_21 euxassay_004293_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14470Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14470_wholemount_strong.wlz
14470_wholemount_moderate.wlz
14470_wholemount_weak.wlz
14470_wholemount_possible.wlz
14470_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14470_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4385
Entity Detected:2310044H10Rik, RIKEN cDNA 2310044H10 gene ( MGI:1916933)
Sequence:sense strand is shown

>T4385
GCGGGCTGTATGGCTCTCGGTTTTTCTCAACGCTCCCGTATGGTGGCCGCGGGTGCCGGGGTGACCCGGC
TGTTAGTGCTCTTGCTGATGGTAGCCGCGGCTCCTAGCAGAGCCCGAGGCAGCGGCTGCCGGGTCGGGGC
CTCCGCGCGTGGGACCGGGGCCGATGGCCGTGAAGCTGAGGGCTGTGGCACCGTGGCTTTGCTGCTGGAG
CATTCATTTGAGCTCGGTGATGGAGCCAACTTCCAGAAGCGAGGCTCGCTGCTCTGGAACCAGCAGGATG
GCACCCTGTCGGCAACACAGCGACAGCTCAGTGAGGAGGAGCGTGGCCGACTCCGGGATGTGGCTGCTGT
CAATGGCCTCTACAGGGTCCGGGTCCCGAGGCGGCCTGGGACACTTGATGGTTCAGAAGCTGGCGGCCAT
GTGTCTTCCTTCGTCCCAGCGTGCTCCCTGGTGGAGTCGCACCTTTCGGACCAGCTGACCTTGCACGTGG
ATGTGGCTGGCAACGTGGTGGGCCTGTCTGTGGTGGTGTACCCTGGGGGCTGCCGGGGCTCCGAGGTGGA
AGATGAGGACCTGGAGCTGTTCAATACATCTGTGCAGCTGCGGCCTCCCAGCACTGCTCCAGGCCCCGAG
ACTGCCGCCTTCATTGAGCGCCTGGAAATGGAGCAGGCCCAGAAGGCTAAGAACCCACAGGAGCAGAAGT
CTTTCTTTGCCAAATACTGGATGTACATCATTCCAGTTGTGCTGTTCCTCATGATGTCAGGAGCGCCGGA
CGCCGGGGGCCAGGGTGGCGGTGGGGGCGGGGGCAGCAGCCGGTGAGCAGCTGTGCCACCTAGAACCCCC
CTCCCCCCCAGAGCCAGCCCAAGAAGGAGTTCCTGTCCCCACATCTCCCTATTGCATGAATATGGAAGGC
TGTCCCTTCAGTGAGCCCTCTGGCCTTCCTGTAAGCCCCTCTTTCTGTCCCTGAGCCTCTCTCTCATCCT
GTTGACTGAGAGCTTGGGTGGACCTCCCTGTAGCCAGCTCACTGGCTTCCCTGAGCACTGCAACTGTGTC
CCACCATGTGGCACTGTGCTCCTCTGTCTGCTAAACACCCACCAGCCTGCCCTACCCCACCCCACCATAC
ACTTTGGGAACTTGCCAAGCTCTCTCCAGCCTCTGTGCCTTTGCCCTGCAGGCCCCGTGCGCCCCTCACT
GTCACTCTCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGGCTAGGTCAGCCTC
CAGCCCACTGTCCAGGTGGCATGCTGTCTTCTTTGCCCCCCTCTCTGGTGCCCCAGAATACCATGGTGAC
CTATCACTATCCTTTCTGCCTTTGGATGTCCCAGCCTGGATCTGTCACCAGGAGAGGATTGTGGGCCTCC
ACGTTAGTCTGTGAATGCACACTTCGAGTGACTTGTGTGCAGGTTTTGAGAGCCGGTTTTGCACTAGCTG
CTCGACAGCTGCTGGCATGGCCGTGCTCTTGCACATGCGCCGCTGTGGGCATGGGAATTGCTGTGCAGCC
TCAGCTGTGTTGTATGGCTGCTGATTAAACTGTCCCCTAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4913500 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4913500 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14467 same embryo
 EMAGE:14468 same embryo
 EMAGE:14465 same embryo
 EMAGE:14469 same embryo
 EMAGE:14466 same embryo
 EurExpress:euxassay_004293 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS