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EMAGE:14684

Lpxn leupaxin ( MGI:2147677)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14684 EMAGE:14684 EMAGE:14684 EMAGE:14684 EMAGE:14684
"Pseudo-wholemount" of euxassay_005597. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_005597_01 euxassay_005597_02 euxassay_005597_03 euxassay_005597_04
EMAGE:14684 EMAGE:14684 EMAGE:14684 EMAGE:14684 EMAGE:14684
euxassay_005597_05 euxassay_005597_06 euxassay_005597_07 euxassay_005597_08 euxassay_005597_09
EMAGE:14684 EMAGE:14684 EMAGE:14684 EMAGE:14684 EMAGE:14684
euxassay_005597_10 euxassay_005597_11 euxassay_005597_12 euxassay_005597_13 euxassay_005597_14
EMAGE:14684 EMAGE:14684 EMAGE:14684 EMAGE:14684 EMAGE:14684
euxassay_005597_15 euxassay_005597_16 euxassay_005597_17 euxassay_005597_18 euxassay_005597_19
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euxassay_005597_20 euxassay_005597_21 euxassay_005597_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14684Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14684_wholemount_strong.wlz
14684_wholemount_moderate.wlz
14684_wholemount_weak.wlz
14684_wholemount_possible.wlz
14684_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14684_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4841
Entity Detected:Lpxn, leupaxin ( MGI:2147677)
Sequence:sense strand is shown

>T4841
CTAGAGCATCGCAGGTATAGGACAATGGAAGAGCTGGATGCCTTATTGGAGGAATTGGAACGCTGCACCT
TTCAGGACAGTGAGGAATATTCAAATCCAGTTTCTTGTCACCTGGATCAGCAATCCACAGAGGAGAGCAA
GATTCCCCAAACTCCAAAGACCTTGTCATCGCAGGGTAACACAAGTCCCTTGAAGGTGCAGCTCGTGTAT
GCAACCAATATCCAGGAGCCCAATGTCTACAGTGAGGTCCAAGAGCCAAAGGAATCAGTCCTGCCTCCCA
AAACCTCAGCAGCTGCTCAGTTGGATGAGCTCATGGCCCACCTGAGTGAAATGCAGGCCAAGGTTTCAGT
GAAAGCAGACACCAGCAGGAAACCCTTGCCAGACGAGCAGGATCACAAGGCATCTCTGGACTCAATGCTG
GGGGACTTGGAACAGGAACTACAAGATCTTGGGATTGCCACAGTCCCCAAGGGCTACTGTGCTTCCTGCC
AGAAGCCAATTGCTGGGAAGGTGATCCATGCTCTGGGGCAATCCTGGCACCCTGAGCACTTTGTCTGCAC
TCACTGCAAGGAGGAGCTCGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCCTGGCCTACTGCTCAAAAGAC
TACCACCACCTGTTCTCTCCACGCTGTGCCTACTGTGCTGCTCCCATCACAGATAAAGTGCTGACAGCAA
TGAACAAGACATGGCACCCAGAGCACTTCTTCTGCTCTCACTGTGGAGAGGTATTTGGTGCAGAAGGCTT
TCATGAGAAGGACAAGAAGCCATACTGCCGAAAGGATTTCTTAGCCATGTTCTCACCCAAATGTGGTGGC
TGCAACCGCCCAGTGCTGGAAAACTACCTTTCAGCCATGAACACTGTCTGGCACCCAGAGTGCTTTGTGT
GTGGGGACTGCTTCAGTAGTTTTTCTTCTGGCTCCTTCTTTGAACTGGATGGCCGTCCTTTCTGTGAACT
CCATTACCATCACCGCCGAGGGACCCTCTGCCATGACTGTGGGCAGCCCATCACTGGCCGTTGCATCAGT
GCCATGGGACATAAATTTCATCCTGAGCACTTCGTGTGTGCTTTCTGCCTGACACAGCTGCCGAAAGGCA
TCTTCAAGGAGCAGAACAACAAGACCTACTGTGAAAAATGCTTCACTAAGCTCTTTTCACAGTAGTTCTC
CTTTGACTCACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC
CCCAGCCTTCTGTTCAGTGGGCTAATGGAGTACAAATGGGCCTTTGTAGATGTTACTAGGCATATAACCT
TCATTTTGAAGATGCTTCTCATTACTTTTTAATTATATATTTGTATTTAGATTTAGATCATGCTATCAAG
AGCCTCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCTCACTTTTTAC
CTCTGCTGATGCTCTGTTCAAATCTTCAGATGTGGGCCACAGAGTTTTACTCTCTCTTTGCTGTCAGGGG
TCACGCAATAGTCTTAAACCCTTAGTGTCTCTGCATTTTGCTTTTTAAGCGGAAGTGTATTTTTACTGAC
ACATGTGATGAATAAAGCAGCTTGTGGTTTTGGTGACTCACAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5065405 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5065405 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14683 same embryo
 EMAGE:14681 same embryo
 EMAGE:14686 same embryo
 EMAGE:14685 same embryo
 EMAGE:14682 same embryo
 EurExpress:euxassay_005597 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS