Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:14762

Nckap1l NCK associated protein 1 like ( MGI:1926063)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14762 EMAGE:14762 EMAGE:14762 EMAGE:14762 EMAGE:14762
"Pseudo-wholemount" of euxassay_005731. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_005731_01 euxassay_005731_02 euxassay_005731_03 euxassay_005731_04
EMAGE:14762 EMAGE:14762 EMAGE:14762 EMAGE:14762 EMAGE:14762
euxassay_005731_05 euxassay_005731_06 euxassay_005731_07 euxassay_005731_08 euxassay_005731_09
EMAGE:14762 EMAGE:14762 EMAGE:14762 EMAGE:14762 EMAGE:14762
euxassay_005731_10 euxassay_005731_11 euxassay_005731_12 euxassay_005731_13 euxassay_005731_14
EMAGE:14762 EMAGE:14762 EMAGE:14762 EMAGE:14762 EMAGE:14762
euxassay_005731_15 euxassay_005731_16 euxassay_005731_17 euxassay_005731_18 euxassay_005731_19
EMAGE:14762 EMAGE:14762 EMAGE:14762
euxassay_005731_20 euxassay_005731_21 euxassay_005731_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14762Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14762_wholemount_strong.wlz
14762_wholemount_moderate.wlz
14762_wholemount_weak.wlz
14762_wholemount_possible.wlz
14762_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14762_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T2730
Entity Detected:Nckap1l, NCK associated protein 1 like ( MGI:1926063)
Sequence:sense strand is shown

>T2730
CCTCTGTCAGCCTCTTGCAGCTGGGCCAGGAGACTGACAAGCTCAAAACCAGAAATCGTGAATCCATTTC
TCTGCTCATGCGCTTGGTGGTGGAGGAGTCACCCTTCTTGACCCTGGACATGCTGGAGTCCTGTTTCCCT
TACGTTCTGCTACGCAATGCCTATCGGGAGGTTTCCCGGGCCTTCTACTTGAACCGTCTGCCAGCCAGTT
CCCACTGAGGGCCCTTTGGAGGTGCCAAGAACCATGCTGCAGTGAAAGTTGCAGCCATTTCTTCAAAAGG
GGAGAAGAGTGGGAGGGAGCTCAGGGAGAGACAGGTCAGGCCCCACAGCTGAAAGGGATAAGGAGGAATA
TCCAGGGCTGAGGAATCATGGAGAAGTGGACAGGCTGGGGCCATGGAGGACAATTTATAGATAAAGGAGT
GTGGAACCACATGTATGAATTTTTAACCGTGGGGCGGTGGTGAAAAACCAGTGACCTACAAGCATATTGT
GTATCTTCTGGTGACTCCAGCTTCAGCTCTGACAGGCATGGGCCTCTCCGACCTTCATCACTATTCTA
Notes:The probe template was PCR amplified from IMAGE:1513292 using vector specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T3 polymerase. EMAGE Editor's Note: the partial probe sequence indicated here was given by the EURExpress Consortium and has been checked using BLAST comparison against all available partial insert sequences of IMAGE:1513292 from NCBI. In cases where no BLAST hit was found (because the two sequence reads are found at opposing ends of the insert sequence), both end sequences were then checked against the appropriate cDNA RefSeq to ensure validity of the information.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14760 same embryo
 EMAGE:14763 same embryo
 EMAGE:14759 same embryo
 EMAGE:14761 same embryo
 EMAGE:14764 same embryo
 EurExpress:euxassay_005731 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS