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EMAGE:14824

Tbx2 T-box 2 ( MGI:98494)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14824 EMAGE:14824 EMAGE:14824 EMAGE:14824 EMAGE:14824
"Pseudo-wholemount" of euxassay_005803. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_005803_01 euxassay_005803_02 euxassay_005803_03 euxassay_005803_04
EMAGE:14824 EMAGE:14824 EMAGE:14824 EMAGE:14824 EMAGE:14824
euxassay_005803_05 euxassay_005803_06 euxassay_005803_07 euxassay_005803_08 euxassay_005803_09
EMAGE:14824 EMAGE:14824 EMAGE:14824 EMAGE:14824 EMAGE:14824
euxassay_005803_10 euxassay_005803_11 euxassay_005803_12 euxassay_005803_13 euxassay_005803_14
EMAGE:14824 EMAGE:14824 EMAGE:14824 EMAGE:14824 EMAGE:14824
euxassay_005803_15 euxassay_005803_16 euxassay_005803_17 euxassay_005803_18 euxassay_005803_19
EMAGE:14824 EMAGE:14824 EMAGE:14824 EMAGE:14824
euxassay_005803_20 euxassay_005803_21 euxassay_005803_22 euxassay_005803_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14824Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14824_wholemount_strong.wlz
14824_wholemount_moderate.wlz
14824_wholemount_weak.wlz
14824_wholemount_possible.wlz
14824_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14824_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T35546
Entity Detected:Tbx2, T-box 2 ( MGI:98494)
Sequence:sense strand is shown

>T35546
ACTCTCCGTTTGTATGAGGAGCACTGTAAGCCGGAGCGTGATGGCGCTGAATCCGATGCCTCGTCCTGCG
ACCCTCCGCCTGCGCGAGAACCACCGCCCTCCCCCAGCGCAGCGCCCAGCCCTCTGCGCCTACACCGGGC
CCGAGCCGAGGAGAAGCCGGGCGCAGCCGACAGCGATCCTGAGCCGGAGCGGACGGGGGAGGAGCGCTCC
GCAGCGCCCCTGTGCCGCAGCCCTTCGCGGGACGCCAGCCCCGCTCGCTTGACCGAACCCGAACGCTCCC
GGGAGCGGCGCAGCCCGGAGAGGTGCAGCAAGGAACCGACGGAGGGCGGTGGGGACGGCCCGTTTAGCCT
GCGGAGCCTGGAGAAGGAGCGTCCCGAGGCCCGGAGGAAGGACGAGGGGCGCAAGGACGTGGGTGAGGGC
AAGGAGCCCAGCCTGGCGCCGCTGGTGGTGCAGACAGACAGTGCGTCCCCCCTGGGTGCGGGCCATCTGC
CTGGCCTGGCCTTCTCCAGCCACCTGCATGGGCAGCAGTTCTTTGGGCCGCTGGGAGCTTGCCAGCCCCT
CTTCCTGCACCCAGGACAATTCGCCATGGGCCCCGGAGCCTTCTCCGCCATGGGCATGGGTCATCTGCTA
GCCTCAGTGGCAGGCGGCAGTGGCAGTAGCGGAGGCGCCGGTCCCGGAACCGCGGCGGGGCTGGACGCAG
GCGGGCTAGGTCCCGCAGCCAGCGCAGCAAGCACCGCGGCTCCCTTCCCGTTCCACCTCTCCCAGCATAT
GCTGGCATCTCAGGGAATCCCAATGCCCACTTTCGGAGGCCTCTTTCCCTACCCGTACACTTACATGGCA
GCAGCGGCCGCCGCCGCCTCCGCTTTACCCGCCACCAGCGCTGCAGCTGCCGCCGCCGCAGCCGCTGGTT
CATTATCACGGAGCCCATTTCTG
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from wild type C57BL/6J mouse whole brain cDNA), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 98659. Forward Primer - name:098659_F_cDNA_Tbx2, sequence:ACTCTCCGTTTGTATGAGGAGC; Reverse Primer - name:098659_N_SP6_cDNA_Tbx2, sequence:CAGAAATGGGCTCCGTGATAA. The reverse primer contains a 5' extension containing an Sp6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using Sp6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14825 same embryo
 EMAGE:14821 same embryo
 EMAGE:14820 same embryo
 EMAGE:14823 same embryo
 EMAGE:14822 same embryo
 EurExpress:euxassay_005803 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS