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EMAGE:16867

Bad BCL2-associated agonist of cell death ( MGI:1096330)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:16867 EMAGE:16867 EMAGE:16867 EMAGE:16867 EMAGE:16867
euxassay_008630_01 euxassay_008630_02 euxassay_008630_03 euxassay_008630_04 euxassay_008630_05
EMAGE:16867 EMAGE:16867 EMAGE:16867 EMAGE:16867 EMAGE:16867
euxassay_008630_06 euxassay_008630_07 euxassay_008630_08 euxassay_008630_09 euxassay_008630_10
EMAGE:16867 EMAGE:16867 EMAGE:16867 EMAGE:16867 EMAGE:16867
euxassay_008630_11 euxassay_008630_12 euxassay_008630_13 euxassay_008630_14 euxassay_008630_15
EMAGE:16867 EMAGE:16867 EMAGE:16867 EMAGE:16867
euxassay_008630_16 euxassay_008630_17 euxassay_008630_18 euxassay_008630_19

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:16867Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
16867_wholemount_strong.wlz
16867_wholemount_moderate.wlz
16867_wholemount_weak.wlz
16867_wholemount_possible.wlz
16867_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:16867_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T2842
Entity Detected:Bad, BCL2-associated agonist of cell death ( MGI:1096330)
Sequence:sense strand is shown

>T2842
GCTTGGGCCCAGAGTATGTTCCAGATCCCAGAGTTTGAGCCGAGTGAGCAGGAAGACGCTAGTGCTACAG
ATAGGGGCCTGGGCCCTAGCCTCACTGAGGACCAGCCAGGTCCCTACCTGGCCCCAGGTCTCCTGGGGAG
CAACATTCATCAGCAGGGACGGGCAGCCACCAACAGTCATCATGGAGGCGCAGGGGCTATGGAGACTCGG
AGTCGCCACAGTTCGTACCCAGCGGGGACCGAGGAGGATGAAGGGATGGAGGAGGAGCTTAGCCCTTTTC
GAGGACGCTCGCGTTCGGCTCCCCCCAATCTCTGGGCAGCGCAGCGCTACGGCCGTGAGCTCCGAAGGAT
GAGCGATGAGTTTGAGGGTTCCTTCAAGGGACTTCCTCGCCCAAAGAGCGCAGGCACTGCAACACAGATG
CGACAAAGCGCCGGCTGGACGCGCATTATCCAGTCCTGGTGGGATCGAAACTTGGGCAAAGGAGGCTCCA
CCCCCTCCCAGTGATCTTCTGCTCCACATCCCGGAACTCTACCCGCTCCC
Notes:The probe template was PCR amplified from IMAGE:1528951 using vector specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T3 polymerase. EMAGE Editor's Note: the partial probe sequence indicated here was given by the EURExpress Consortium and has been checked using BLAST comparison against all available partial insert sequences of IMAGE:1528951 from NCBI. In cases where no BLAST hit was found (because the two sequence reads are found at opposing ends of the insert sequence), both end sequences were then checked against the appropriate cDNA RefSeq to ensure validity of the information.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:16864 same embryo
 EMAGE:16866 same embryo
 EMAGE:16865 same embryo
 EMAGE:16863 same embryo
 EMAGE:16868 same embryo
 EurExpress:euxassay_008630 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS