EMAGE mouse gene expression spatial database

Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:17088

Zfp472 zinc finger protein 472 ( MGI:2385049)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


euxassay_001487_01	euxassay_001487_02	euxassay_001487_03	euxassay_001487_04	euxassay_001487_05

euxassay_001487_06	euxassay_001487_07	euxassay_001487_08	euxassay_001487_09	euxassay_001487_10

euxassay_001487_11	euxassay_001487_12	euxassay_001487_13	euxassay_001487_14	euxassay_001487_15

euxassay_001487_16	euxassay_001487_17	euxassay_001487_18	euxassay_001487_19	euxassay_001487_20

euxassay_001487_21	euxassay_001487_22	euxassay_001487_23

View assay images:
Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

17088_wholemount_strong.wlz

17088_wholemount_moderate.wlz

17088_wholemount_weak.wlz

17088_wholemount_possible.wlz

17088_wholemount_not_detected.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:17088_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Annotation Validation:

spatial mapping by EMAGE editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T4457
Entity Detected:	Zfp472, zinc finger protein 472 ( MGI:2385049)
Sequence:	sense strand is shown >T4457 GGGAGAGTTGTGCTTGAGCTTCCCGGTGCCTGTTCTGCCGACTGGCGCTCAGTAGGAAGAACGCCTGGAT GCATCAGAAGCAGGAAATGGAGCCAGTGACCTTTGAGGATGTGGCTGTGAACTTCACTCTAGGAGAGTGG ACTATGTTGGACTCTAGTCAAAAGAAGCTCTACAGAGATGTGATGAAGGAGACCTTTTTGAACCTGATCT CTATAGGGAAAACAGAAGAAGAAGATACTGAAGAAGAGTACCAAAATCCTAAGGGAAACCTGAGAACCCT GATGGTTGAGAGACTCTGTAAATATGATTATGGTAATCAGTATGGAGAAACTCACCAACAGAGTCCAGAG CATGTTGCGAATGAAAAAATGCCTCCAGCCATAACAGAATGTGAAAGAGACATCTGTACTCATTTACCCT CAGACATACACTTCAAAGGTCAAACTGGAGAGAAATCATTCCAGTATCAGGAACATACAGAGAAGGCTTT GAAACATAAGAACTGTTGGAAGGACTTCACTTATTCTGAGTTGCTTTGGATGCATAAAAGCCCTCCCATG AGACAGAAGCCCTATGAAGATAAACAAGGGACTGAAGCCTCTAGGAGTTTCACTACCGATCATGATTATG AGGGAGCTTACACTGAAGAGAAATCTTATATTTGTAAACAGTGTGGGAAAGCATGGAGTGATTCCTGTAG CCTTCTCTGGCATGAAAGAAGTCACATTCAAGAGAAACGTCACACATGTAAGCAATGTGGAAAAGCTTTT AGTCGTCCCTCACAGCTTCACAAACATGAAAGGATTCACACTGGTGAGAAACCTTATGTGTGTACACATT GTGGGAAAGCCTTCATTGATCGCAGAACCTGTCACAACCATGAAAGGACTCACACTGGAGTGAAACCCTT TGCCTGTAAGCAATGTGGGAAAGCATTTCTTCGTTCCTGCCAACTTCTCATCCATGAAAGAATCCATACT GGAGAGAGACCTTTTGTGTGTAAGCATTGCGGAAAAGCTTTCACCTATTCCAGTGCCTGCTATTATCACG AAAGAATTCACACTGGAGAGAAGCCCTGTGTCTGCAAGCAGTGTGGGAAAGCATTCAAATGTTCTGCGTA CCTTCACATACATGAACGATCTCACAGTGGAGAAAAACCCTATGTGTGTAAGCATTGTGGCAAAGCCTTT GCCTATGCCACCGGGTGTCACAAACATGAGAGGATTCACACAGGAGAGAAACCGTATATGTGTGTGCAGT GTGGGAAACTATTCACTTTCCCCAGATCCCTTCACATACACGAGCGATCTCATAGTGGAGAAAAACCTTA TGTATGTAAGCAGTGTGGGAAATCCTTCACTCAGGGAACTTCTTTGCGAAGACATGAACGAATTCACACT GGAGAAAAACCTTATGTATGTAAGCAGTGTGGGAAAGCCTTCATCCAACGTGATGATTGCTACAGTCATG AACGAACTCACACAGGAGAGAAACCATTCATGTGTGTTCAATGTGGGAAAACATTCACCTTTTCCAAATC TCTTCAGATACATGAAAAAAATCACACTGGGGAGAAACCCTATATATGTAAGCAGTGTGGGAAAGCGTTC ACCTGTTCCACATACCTTCTCAGACATGAACGAACTCACAGTGAGAAGAAGCTCAGTGGCTAATATTTCT CGCACTCTAAATCATGGGAATGTCTGATGTCAACTTTTATTTTGAGGTATGAAGGAAAATGGAGAGCCAC TGTAAGATTATGAGAAATGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTGTACA ACAGGTTTTGCTGCTGCGTGTCTTTTGTTCCAGTAATGAAAAAGTAAAAGTTATGCAATTACAATATCCA ATGAAGCCTGTGCTGTTTCCTGGGTTTGAACACAGCTTGGGAGGTTTATCCACCAATTTCAACTAAATGA AATTGTCTGTAAATATAAAAAAGTTGCATTTTTTACCAATAAGATAAAATTTATGACAGTATCTCATGTG GTTGAGTCCTATGAAAGAAATATGAAGATATTGAAGGTTAATTTGTGTTGAATATTTCTGAAAATAAACT GTGAAAGTGATACGGTAAGTTCTGAGTATTTTTAAAAACCTTGATTATTTAAATAAAGTGTGTTTTATTT TCCTGAAAAAAAAAAAAAAAAAAAAA
Notes:	The probe template was PCR amplified from IMAGE:4945483 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4945483 which was retrieved directly from NCBI.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EMAGE:17086 same embryo
	EMAGE:17087 same embryo
	EurExpress:euxassay_001487 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source