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EMAGE:17339

Mrpl45 mitochondrial ribosomal protein L45 ( MGI:1914286)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17339
euxassay_003770_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17339Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17339_wholemount_strong.wlz
17339_wholemount_moderate.wlz
17339_wholemount_weak.wlz
17339_wholemount_possible.wlz
17339_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17339_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6991
Entity Detected:Mrpl45, mitochondrial ribosomal protein L45 ( MGI:1914286)
Sequence:sense strand is shown

>T6991
AAAATGGCGGCCCCCGTACCTCGGGGCTTGTCCTCCTTATACAGGACTTTGGGATGGTGGTCTCGGCAGC
CCATTCTGGTGACTCAGTCCACAACTGTAGTTCAAGTTAAAACCAAAAGCCGTTTTAGACCCCCAACTCC
TGAACCCAAGTACAAAACAGAGAAGGAGTTTTTGGAGTATGCCAGGAAAGCGGGATTGGTCATTCCACAG
GAACGGTTGGAGCGCCCTATACATTTGGCCTGTACAGCTGGTATATTTGATCCCTATGTTCCACCAGAGG
GTGATGCTCGAATGTCATCTCTTTCAAAGGAAGGATTGACACAGAGAACTGAGCGATTGAGAAAGAATGC
GGCATCACAGCTGGCAATCCGAAAGATAAGAGAATTTGATACAAATTTTAAAACAAAAGACTTCCCTGAA
AAAGCTAAGGATATTTTCATTGAAGCTCACCTTTGTCTAAACAACTCAGACCATGACCGGCTTCATACCT
TGGTAACTGAACACTGTTTTCCGGACATGGTCTGGGACCTCAAGTACAAGACTGTACGCTGGGGCTTTGT
GGAATCTCTAGAGCCAGCCCAAGTGGTTCATGTCCGTTGCTCAGGCCTGGTGAACCAGAGCAACATGTAT
GGCCAGGTCACCGTGCGCCTACACACTCGGCAGACTTTGGCCATTTATGATCGGTTTGGCAGATTGATGT
ATGGACAGGAAGATGTGCCCAAGGATGTCCTGGAATATGTGGTGTTTGAAAGACACTTGATGAACCCGTA
TGGGAGCTGGAGAATGCATGCCAAGATTGTGCCCGCGTGGGCACCCCCTAAGCAGCCCATCCTCAAGACC
TTGATGATTCCTGGTCCTCAGCTGAAACCCTGGGAGGAGTACGAAGAGACTCAAGGGGAGGCCCAGAAGC
CTCAGCTAGCCTGATGGCGTTAATGACTCCTGAGGAGCCTAGCAGTTGTGATGAACATCTTTGATCCCAG
CACTCGGAAGGCAGAGGCAGGTGGATTTCTGTGAGTTCGGGGCCAGTCTGGTCTACAGAGCGAGTTGCAG
GACAACCAGAGCTACACAGAGAAACCCTGTCTCAGGAAAAAAAAACAAAAAGAAAAAAGACAAAAAGACT
CCTGAGGTGTTCCGATGGGGCTGCAAAGTCACCTGTACCCACCTGTACCCCGAAGGCTTCCCGTGCTGTC
TCCTGTCCTGCCTGGGTCAGCAGTCCCCCAAGCCCCTCACAGTCATGGCTGATTGTGTGGCCAGGTGGTG
GCTGGGGTGCCCCGCCTTGGAGCATCTTCTGTTTACAGCCATGTTCAGCTTCTGAGGTGAAATGAGAAGC
AGCAGCAGAGAGAACAAACGCGACACTGGGCTTTTCCCAGCAGCAGCAAGCTGTGGCATCAGACCCACAG
CTTTCTTTTTTCTAATTATAGGCGGAGTCAGCATTTGGAATAAAATACTGTCAAAGAGTTGGAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3990098 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3990098 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17338 same embryo
 EMAGE:17337 same embryo
 EMAGE:17335 same embryo
 EMAGE:17336 same embryo
 EurExpress:euxassay_003770 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS