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EMAGE:17950

Tgoln2 trans-golgi network protein 2 ( MGI:105079)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17950 EMAGE:17950 EMAGE:17950 EMAGE:17950 EMAGE:17950
"Pseudo-wholemount" of euxassay_011708. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_011708_01 euxassay_011708_02 euxassay_011708_03 euxassay_011708_04
EMAGE:17950 EMAGE:17950 EMAGE:17950 EMAGE:17950 EMAGE:17950
euxassay_011708_05 euxassay_011708_06 euxassay_011708_07 euxassay_011708_08 euxassay_011708_09
EMAGE:17950 EMAGE:17950 EMAGE:17950 EMAGE:17950 EMAGE:17950
euxassay_011708_10 euxassay_011708_11 euxassay_011708_12 euxassay_011708_13 euxassay_011708_14
EMAGE:17950 EMAGE:17950 EMAGE:17950 EMAGE:17950 EMAGE:17950
euxassay_011708_15 euxassay_011708_16 euxassay_011708_17 euxassay_011708_18 euxassay_011708_19

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17950Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17950_wholemount_strong.wlz
17950_wholemount_moderate.wlz
17950_wholemount_weak.wlz
17950_wholemount_possible.wlz
17950_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17950_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T37134
Entity Detected:Tgoln2, trans-golgi network protein 2 ( MGI:105079)
Sequence:sense strand is shown

>T37134
CAAAATCTTCCCAGATACGGAGACTTCGAAGACTGACAAAGTCCAGCCAACTGAAAAAGGACAAAAAGCA
ACACTTACTTCCAAAACTGAATCTGGGGAAACACTGGCAGGGGACTCTGACTTCTCTTTAAAGCCAGAGA
AAGGAGATAAGTCTTCAGAGCCTACTGAAGACGTGGAAACCAAGGAGATTGAAGAGGGTGACACAGAGCC
GGAAGAAGGCTCACCACTTGAAGAAGAGAATGAAAAGGTGTCGGGCCCTTCCTCCAGTGAGAACCAAGAG
GGGACACTTACAGATTCTATGAAGAATGAGAAGGATGATCTTTATAAGGACAGTTCTGGAAACACCAGTG
CAGAGAGCAGCCACTTCTTTGCATATCTAGTGACCGCTGCTGTTCTCGTTGCTGTCCTCTATATTGCTTA
CCACAACAAACGGAAGATTATTGCTTTTGCTCTGGAAGGGAAAAGATCCAAAGTCACTCGGAGGCCGAAG
GCCAGTGACTACCAACGTTTGAACCTAAAGCTTTGATCTTTACTTTGTCTGCAAGAACCGTGTCCTCCCT
GCTGATTTGTTCCCAATCAAGAGAAATGAAAAGACTGTGACCTCTGGGGTTTGGTGGCAAGTCTGGGCTG
GCAGAGATGAGATAGCTTCAGGTTTTGCACCGGCACTTTGATGACACTCTCCTCTGGTGATGTTTTA
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from wild type C57BL/6J mouse whole brain cDNA), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 74207. Forward Primer - name:074207_F_cDNA_Tgoln2, sequence:CAAAATCTTCCCAGATACGGAG; Reverse Primer - name:074207_N_SP6_cDNA_Tgoln2, sequence:TAAAACATCACCAGAGGAGAGTG. The reverse primer contains a 5' extension containing an Sp6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using Sp6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17951 same assay
 EMAGE:17948 same embryo
 EMAGE:17952 same embryo
 EurExpress:euxassay_011708 same experiment
 EMAGE:17949 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS