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EMAGE:19064

Fbxo41 F-box protein 41 ( MGI:1261912)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19064 EMAGE:19064 EMAGE:19064 EMAGE:19064 EMAGE:19064
"Pseudo-wholemount" of euxassay_015941. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_015941_01 euxassay_015941_02 euxassay_015941_03 euxassay_015941_04
EMAGE:19064 EMAGE:19064 EMAGE:19064 EMAGE:19064 EMAGE:19064
euxassay_015941_05 euxassay_015941_06 euxassay_015941_07 euxassay_015941_08 euxassay_015941_09
EMAGE:19064 EMAGE:19064 EMAGE:19064 EMAGE:19064 EMAGE:19064
euxassay_015941_10 euxassay_015941_11 euxassay_015941_12 euxassay_015941_13 euxassay_015941_14
EMAGE:19064 EMAGE:19064 EMAGE:19064 EMAGE:19064 EMAGE:19064
euxassay_015941_15 euxassay_015941_16 euxassay_015941_17 euxassay_015941_18 euxassay_015941_19
EMAGE:19064 EMAGE:19064 EMAGE:19064 EMAGE:19064 EMAGE:19064
euxassay_015941_20 euxassay_015941_21 euxassay_015941_22 euxassay_015941_23 euxassay_015941_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19064Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19064_wholemount_strong.wlz
19064_wholemount_moderate.wlz
19064_wholemount_weak.wlz
19064_wholemount_possible.wlz
19064_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19064_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T63404
Entity Detected:Fbxo41, F-box protein 41 ( MGI:1261912)
Sequence:sense strand is shown

>T63404
CCCAGCAGGTAAAGTACTGGTCAGTTGGAGGAGGCTACTTCTCGCTACCACAATATAGAGCTAAGCTCAA
AGCAGTCTCTATACAACTCCTTGCTTCGGGGATCACAGAGAGCAAGGGACCCAGCAAAGCCCTACAGTGA
GAAGGGACCTCTTAACCCAGGCATTTCGGCAAGATCCCCAAAGGGAGGGGAGACCCCGGGCTACCTGCTG
TGCTGGAGTTTGGGGGAGGGGGAGCTTGCTTGACCTAACTAGTGGCTTGAGAAGCCTTTGGCAAGGAGCC
AGATCCTGGTGCTGAGGCGGAGGAATAATTTCCACAGCCTGTGTCTCTACAGTCCTGGGCTGAAACTATA
GTAGGAGAATCCTTGTGATAGGGTGTCGCCGGCCCTTGCATCGTACCCAAGAAGTCTGGTCACCAAAGCC
CCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGGAGTGGCCGAGGCCATGAGTCTTGG
CAGCCCTCATTTGGGCAGATCTTTCAAACGCCTGGTTTGTCGTCCACATCTTAGGGTTTTCTTTGCTCCT
TTGTAAGGTGGGATCCTCTTGCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCT
GTATGTTGCTGCCACACAAGTCCCTTCCATTGCTGCACAGCCTCCAGCTCGATGCTCCCCGATCCTATAG
CCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGTACCTGCTCTTTACACACTGAAAT
GCCAAGGCTGTCAGTGCTGGATACTCCATGCCTAGTCCTGCATGAAACCTTGG
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from wild type C57BL/6J mouse whole brain cDNA), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 101254. Forward Primer - name:101254_F_cDNA_D6Ertd538e, sequence:CCCAGCAGGTAAAGTACTGGTC; Reverse Primer - name:101254_N_SP6_cDNA_D6Ertd538e, sequence:CCAAGGTTTCATGCAGGACTA. The reverse primer contains a 5' extension containing an Sp6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using Sp6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19063 same embryo
 EMAGE:19065 same embryo
 EMAGE:19062 same embryo
 EMAGE:19066 same embryo
 EMAGE:19067 same embryo
 EurExpress:euxassay_015941 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS