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EMAGE:19554

Spcs2 signal peptidase complex subunit 2 homolog (S. cerevisiae) ( MGI:1913874)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19554 EMAGE:19554 EMAGE:19554 EMAGE:19554 EMAGE:19554
"Pseudo-wholemount" of euxassay_004970. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004970_01 euxassay_004970_02 euxassay_004970_03 euxassay_004970_04
EMAGE:19554 EMAGE:19554 EMAGE:19554 EMAGE:19554 EMAGE:19554
euxassay_004970_05 euxassay_004970_06 euxassay_004970_07 euxassay_004970_08 euxassay_004970_09
EMAGE:19554 EMAGE:19554 EMAGE:19554 EMAGE:19554 EMAGE:19554
euxassay_004970_10 euxassay_004970_11 euxassay_004970_12 euxassay_004970_13 euxassay_004970_14
EMAGE:19554 EMAGE:19554 EMAGE:19554 EMAGE:19554 EMAGE:19554
euxassay_004970_15 euxassay_004970_16 euxassay_004970_17 euxassay_004970_18 euxassay_004970_19
EMAGE:19554 EMAGE:19554 EMAGE:19554
euxassay_004970_20 euxassay_004970_21 euxassay_004970_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19554Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19554_wholemount_strong.wlz
19554_wholemount_moderate.wlz
19554_wholemount_weak.wlz
19554_wholemount_possible.wlz
19554_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19554_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8020
Entity Detected:Spcs2, signal peptidase complex subunit 2 homolog (S. cerevisiae) ( MGI:1913874)
Sequence:sense strand is shown

>T8020
CACGGAGGGAGACAAGATGGCAGCGTCGGCGTCGCAGGGTGGGAGAAGCGGCGGTGGCGGAGGCAGTAGT
GGGGCTGGCGGCGGCCCCAGCTGCGGGACAAGCAGCAGCCGCAGTGGTTTGTTGGATAAGTGGAAGATTG
ATGATAAGCCTGTAAAAATTGATAAGTGGGATGGATCAGCTGTGAAGAACTCTCTGGATGACTCTGCCAA
AAAGGTACTTCTGGAAAAGTACAAGTATGTGGAGAACTTTGGTCTCATTGACGGTCGCCTCACCATCTGT
ACCATCTCCTGCTTTTTTGCCATCGTGGCTTTGATTTGGGATTACATGCACCCCTTTCCTGAGCCCAAGC
CAGTTTTGGCTTTGTGCGTCATATCCTATTTTGTGATGATGGGGATTCTGACCATTTATACCTCATATAA
AGAGAAGAGCATCTTCCTTGTGGCCCACAGAAAAGACCCCACAGGAATGGATCCTGATGATATTTGGCAG
CTGTCCTCCAGCCTCAAAAGGTTTGATGACAAATACACCCTGAAGTTGACCTTCATCAGTGGGAGGACAA
AGCAGCAGCGGGAAGCCGAGTTCACCAAGTCCATTGCTAAGTTCTTTGACCACAGCGGGACATTGGTCAT
GGATGCATATGAACCTGAAATATCCAGGCTCCATGACAGTCTCGCCACAGAAAGAAAAATAAAATAGCCA
CTTGTAAAAGCTCTCCTCCTGCTGGATCATACGACTCACTGGTGGGTAGGGGAGGAGACAGAAAGCTTAA
GCTTGGTCAAGTAAGAAATGTTAAAGATGCCCCTGTCTAATCCACCCTGGATGAATAGAGTTTTCTAGTT
CAGATATGCAGTTGTCCCTTTGATGGCTGTAGCCTCCCTGGTCTGCTGAGTGGTTTTCTGTTGCTTTCCT
TAAGCGTTTTTGTAAGAGCTAAGCATATTTTTCCTTTGTGCTTAATAGTACTTTATGCAGTCTAGCTTTG
TGCCATGCAGCGTTTGAATGCTCAGTTCTTAAGAACTACTAACCTTGCTGGGGCACAGTAGTGTTCACCC
AGAATCCCAGCACTTCCCAGGCTGAGGAAGGGGGAATGATGTGAGGCCATCCTGGGCTGTAGAGCCAGGC
CCTGGCTTGGGGAGTGGGCATTGTTAACTTGTTGCTGACTTTGTGTTGACCCCTGCATCAGCAACTATTT
CCTTAAATCCAGGATACAACTTGTTAAGTGTGACAGCTTCCTTTACACACCATTTTTGTGGGTGTATATA
TATATTTGACTTGGGGAGAATTATTTTTTACAAAAATACAAAATAGCTTTTTAATTTGTTTAAAATAGAC
CTGCCTGTTACTTTTTGTGCTCTTAACCAATTAAAGAAGCCGGTGGCATTTTTTAGTTTTAAAAAAAAAA
AAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:30026746 using vector (pSPORT1) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30026746 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19550 same embryo
 EMAGE:19553 same embryo
 EMAGE:19551 same embryo
 EMAGE:19552 same embryo
 EMAGE:19549 same embryo
 EurExpress:euxassay_004970 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS