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EMAGE:19631

Alppl2 alkaline phosphatase, placental-like 2 ( MGI:108009)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19631
euxassay_005114_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19631Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19631_wholemount_weak.wlz
19631_wholemount_possible.wlz
19631_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19631_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8070
Entity Detected:Alppl2, alkaline phosphatase, placental-like 2 ( MGI:108009)
Sequence:sense strand is shown

>T8070
AAGAGGTAATCCGGCAGATTAAAGGTGTGCCCAGTTATTTGGTTGCTGTTGGAACTAAATCTTCGCCTAT
TTAAGAGGAACACATCAGGACCTCAGCTAGTGTTGTGGTATTGCAGCTTCTCCATCCGCCATCCTCACAG
ACCAGCACCCTGCCACAGCAATGTGGGGAGCCTGCTTGCTGCTGCTGGGCCTCAGCCTACAGGTGTGCCC
GAGCGTCATCCCAGTGGAGGAGGAGAATCCAGCCTTCTGGAACCGAAAGGCAGCCGAGGCCCTGGATGCT
GCCAAGAAGCTGAAGCCCATTCAGACATCAGCTAAGAACCTCGTTATCCTCATGGGAGATGGGATGGGGG
TGTCTACAGTAACCGCTACCCGGATCCTAAAGGGGCAGCAGCAAGGCCATCTGGGACCTGAGACACAGCT
AGCTATGGATCGCTTTCCACACATGGCTCTGTCCAAGACATACAACACAGACAAGCAGATCCCGGACAGC
GCAGGCACAGGTACAGCCTTTCTCTGCGGGGTCAAAACCAACATGAAGGTCATTGGCTTGAGTGCAGCTG
CACGCTTCAACCAGTGCAACACGACATGGGGTAACGAGGTCGTCTCGGTGATGCACCGTGCTAAGAAAGC
AGGAAAGTCTGTGGGAGTGGTGACCACCACGTCGGTGCAGCATGCTTCTCCGGCCGACACCTACGCGCAC
ACTGTGAACCGTGGTTGGTACTCGGATGCACAAATGCCTGCCTCAGCGCTACAGGATGGCTGCAAAGACA
TCTCTACTCAGCTCATCTCCAACATGGACATTGATGTGATCCTCGGTGGTGGCCGCAAGTTCATGTTTCC
CAAGGGGACACCAGACCAGGAATATCCAACTGACACCAAGCAGGCTGGAACCAGGCTGGATGGACGCAAC
CTAGTTCAAGAGTGGCTGGCAAAGCACCAGGGAGCCCGGTATGTTTGGAACCGCTCAGAGCTCATTCAGG
CATCCCTGAACCGATCTGTGACACACCTCATGGGCCTCTTTGAGCCTAACGACATGAAATATGAAATCCA
CCGAGACCCTGCTCAGGACCCTTCCCTGGCCGAGATGACGGAGGTGGCTGTGCGCATGCTCAGCAGGAAC
CCCAAAGGCTTCTATCTCTTTGTGGAAGGGGGTCGCATCGACCATGGCCACCATGAAACTGTAGCCTATC
GTGCCCTGACTGAGGCTGTCATGTTCGACTCAGCTGTTGACAAGGCAGACAAGCTCACCAGTGAGCAGGA
CACGATGATCCTTGTCACTGCCGACCACTCTCACGTCTTCTCTTTTGGTGGTTACACACAGAGAGGGGCT
TCCATCTTTGGACTGGCTCCCTTCAAGGCTGAGGATGGCAAATCCTTTACCTCGATACTATACGGCAACG
GTCCTGGTTACAAGCTCCATAATGGCGCCCGGGCTGATGTCACTGAGGAAGAGAGCAGCAACCCCACGTA
CCAGCAGCAGGCTGCTGTACCCCTGTCGTCAGAGACCCACAGCGGGGAGGACGTGGCAATATTCGCGCGT
GGCCCACAGGCGCACCTGGTGCACGGAGTTCAGGAGCAGAACTACATCGCGCACGTCATGGCCTTCGCAG
CCTGCCTGGAGCCCTACACTGACTGCGGCCTGGCATCCCCTGCTGGCCAGAGCAGTGCAGTGAGCCCGGG
CTACATGTCCACCTTGCTGTGCCTGTTGGCAGGGAAAATGTTGATGCTGATGGCGGCGGCTGAACCCTGA
CTACCTAAGCTCACTACCTAAGACTCCACTTGTTGGCTTGTTCAGTGCCTTTCTGCCAGTACTGTTTTCT
GGGCTCCAGCTGGAAACCCACTTCCTAAGCTCAGAACTAACTTGGTTTGTCAGCTATACCTTAGTATGAG
GCCTCCTTCATCTGGTACTTTTTTTCCCTGCAGTTTTTTGAGACAGGGTCTGGCCTAGTCAAGATTTCAG
TCCACCATCTTAACCTCAGCTTCCCCGAATCTGGGACTGTAGGTGCCTCCTCCTGTGTCTGGCTGCCATA
AAAATGAAGAGTGTTTATCTTCTTGGACCCTTCTTTTTTTTTTTTGTGGGGACAATAAAACCAACTGTTC
CCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG
Notes:The probe template was PCR amplified from IMAGE:30033693 using vector (pSPORT1) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30033693 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19627 same embryo
 EMAGE:19628 same embryo
 EMAGE:19629 same embryo
 EMAGE:19630 same embryo
 EurExpress:euxassay_005114 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS