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EMAGE:19658

Tsr2 TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) ( MGI:1916749)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19658 EMAGE:19658 EMAGE:19658 EMAGE:19658 EMAGE:19658
"Pseudo-wholemount" of euxassay_006101. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_006101_01 euxassay_006101_02 euxassay_006101_03 euxassay_006101_04
EMAGE:19658 EMAGE:19658 EMAGE:19658 EMAGE:19658 EMAGE:19658
euxassay_006101_05 euxassay_006101_06 euxassay_006101_07 euxassay_006101_08 euxassay_006101_09
EMAGE:19658 EMAGE:19658 EMAGE:19658 EMAGE:19658 EMAGE:19658
euxassay_006101_10 euxassay_006101_11 euxassay_006101_12 euxassay_006101_13 euxassay_006101_14
EMAGE:19658 EMAGE:19658 EMAGE:19658 EMAGE:19658 EMAGE:19658
euxassay_006101_15 euxassay_006101_16 euxassay_006101_17 euxassay_006101_18 euxassay_006101_19
EMAGE:19658 EMAGE:19658 EMAGE:19658
euxassay_006101_20 euxassay_006101_21 euxassay_006101_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19658Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19658_wholemount_strong.wlz
19658_wholemount_moderate.wlz
19658_wholemount_weak.wlz
19658_wholemount_possible.wlz
19658_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19658_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T9634
Entity Detected:Tsr2, TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) ( MGI:1916749)
Sequence:sense strand is shown

>T9634
GTGATCTAAACGGATGATGGCGGGCGCCGCTGAAGATGTGCGTGTGCTCTTCGGAGCTGCAGTCCGAGCT
GCGCTGGAGGCTTGGCCTGCTTTACAGATCGCTGTGGAGAATGGCTTCGGGGGCGTGCACAGCCAGGAGA
AGGCCGAGTGGCTAGGGGGTGCAGTGGAGGATTACTTCATCGCCAATGCTGACTTGGAGCTGGAAGAGAT
AGAAGATTTTCTTGGGGAGCTGATGACCACTGAGTTTGATACAGTTGTGGAAGATGGGAGTCTGCCCCAG
GTGAGCCAACAGCTACAGACCATGTTCCACCACTTCCAGAAGGGTGATGGGGCTGCTCTTCAGGAGATGA
CCTCTCAGATCAACCAAAAAAAGTGCAAAGTCACGGCTACCCCACTTATGACAGCCAAAGAAACTGATGT
GGCTGAAGATGATGTGGACAGCGTGGAAGAAATGGAGGTGACAGCTACTAATGATGGGGCCACAACTGAC
GAGGTCTGCCCACAGCCTCAACCCTCTGATCCAGACACCCAGACTATTAAGGAAGAGGATATAGTTGAAG
ACGGTTGGACCATTGTCCGGAGAAAGAAATGAGCAGGGCAGTACATGTTTTGGGCCCTCGTTTGTTAAAT
GTTATGAGACTTATAGGAGCTGTTTGGGGGCTATACACCTCTGTTCTGGAAACCATAACCCTTCTTTGTT
CCCCTGTCCTTCCCTTCAGGAGAAGGAAAGCCCTAGTTGTGGGGTTGATGGGACCTATTCCAGCCCCTTG
AATCTTAAGGTACCATATGAGAGCTAAGAGCAGGTTTCCCAGCATAGTACCTCCTAGGTGCAGTGACTAT
GAAGACGGCTGACAAGTGTGGGTGTGGTTGTAGACCAGACTTGTGGAAAACTGGCAGGTACATTTGTGGA
AAGGACCAGAATTCCACAGTGGTAGGCTGGCTGGATTGGTAATCCAGCCAGGATAAGCATACAGTTGGAA
GAGAGAAAAGATGTAGACATCTCTACATTCCCCAATGTCCCCACCCTAGCCTCCCTCAGAACAACCCTCA
TCCTGCCCAGAATTTGCATCCTCCTGGGAATGCTCCCTGTTTGAATACCCTTGAGAGTTTGAAGGACTTG
ACTAAAAGTGGTGAACTTGAGAAAGTTGGGCTGTTTTAAGTCCAGGGATGAGGCTTAAGACCTTAATAAC
ATATAACATTTTCTTGTTTAATCCATGATTTAACCTTGGAATCAGCTTTCTGCAAGCTGAGCTTCAAAAT
TTGGCAAGAGAGTAGTTTCTGTACCCTCCCATCTCCCTTAGTAGCCTGGGACTTTGGACAAACGGACGGA
CCATAGCAGTGCTCTGAAAGTTACTGTATGCCTGAAATAAACTGTATTTTTCTTTAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6535058 using vector (pDNR-LIB) specific primers. Forward Primer - name:M13 forward (-21), sequence:TGTAAAACGACGGCCAGT; Reverse Primer - name:T3-pDNR-LIB rv, sequence:CAAATTAACCCTCACTAAAGGGTGTTCACTTACCTACTGGGC. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6535058 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19657 same embryo
 EMAGE:19656 same embryo
 EMAGE:19655 same embryo
 EMAGE:19654 same embryo
 EurExpress:euxassay_006101 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS