Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:21567

Ntan1 N-terminal Asn amidase ( MGI:108471)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:21567 EMAGE:21567 EMAGE:21567 EMAGE:21567 EMAGE:21567
euxassay_001111_01 euxassay_001111_02 euxassay_001111_03 euxassay_001111_04 euxassay_001111_05
EMAGE:21567 EMAGE:21567 EMAGE:21567 EMAGE:21567 EMAGE:21567
euxassay_001111_06 euxassay_001111_07 euxassay_001111_08 euxassay_001111_09 euxassay_001111_10
EMAGE:21567 EMAGE:21567 EMAGE:21567 EMAGE:21567 EMAGE:21567
euxassay_001111_11 euxassay_001111_12 euxassay_001111_13 euxassay_001111_14 euxassay_001111_15

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:21567Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
21567_wholemount_strong.wlz
21567_wholemount_moderate.wlz
21567_wholemount_weak.wlz
21567_wholemount_possible.wlz
21567_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:21567_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
head mesenchyme
weak weak
regionalweak expression: see section 2 3 4 7 4 5
Annotation Validation: spatial mapping by EMAGE editor, text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4726
Entity Detected:Ntan1, N-terminal Asn amidase ( MGI:108471)
Sequence:sense strand is shown

>T4726
CCACGCGTCCGGGGCGAAGCGGAGCGGGGCGGGGCGGGGCGGTGGCCGCCTAACTCGGCCTGGCGGCGGC
CTAGACGATGCCACTGCTAGTGGACGGGCAGCGCGTCCGTCTGCCACGGTCGGCTGTGGAGCTGGTCCGG
GCGCACCCGCCTCTGGAGGAAAGAGCCAGACTTCTCAGAGGTCAGTCTGTTCAACAAGTGGGACCCCAGG
GCCTTCTGTATGTTCAGCAAAGAGAGCTTGCAGTGACCTCCCCAAAGGATGGCTCCATCTCCATTCTGGG
TTCTGATGATGCTACCACTTGTCACATTGTAGTCCTGAGACATACAGGAAATGGGGCAACCTGCCTGACA
CATTGTGATGGATCTGACACCAAAGCTGAAGTCCCCTTGATAATGAGCTCCATAAAATCCTTCTCTGAAC
ATGCTGAGTGTGGAAGGCTGGAAGTACATCTTGTGGGAGGCTTCAGTGATGACAGGCAGCTGTCACAGAA
ACTTACTCATCAGCTTCTCAGTGAATTTGACAAACAGGATGATGACATTCACTTAGTGACATTATGTGTA
ACAGAGTTAAATGACCGTGAAGAAAATGAAAATCACTTTCCAATCATTTATGGCATCGCTGTCAACATTA
AAACTGCAGAGATTTACAGAGCTTCCTTTCAAGATCGTGGTCCAGAGGAGCAACTGCGTGCTGCAAGAGC
TTTAGCAGGAGGCCCAATGATTAGCATTTATGATGCAAAGACAGAACAACTCCGAATAGGCCCGTGTTCC
TGGACGCCATTCCCACAAGTGGATTTCTGGTTGCAGCAAGATGACAAGCAAATCCTAGAGAGCCTTTCCA
CGTCTCCTCTGGCCGAGCCCCCCCACTTTGTTGAACATATTAGATCTACCTTGATGTTTTTAAAAAAATT
CCCATCTCCAGAGAATATACTCTTTCCTGGAAATAAAGCTCTCCTCTACAAAAAAAATAAAGATGGCTTG
TGGGAAAAGATCTCCTCTCCAGGGAGCTAACATCAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGA
TAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGTCCTTCCTGTCTTTCAAA
ATAAAATCTTATTTTGGCAAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5037501 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5037501 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_001111 same experiment
 EMAGE:21566 same embryo
 EMAGE:21568 same embryo
 EMAGE:21563 same embryo
 EMAGE:21565 same embryo
 EMAGE:21564 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS