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EMAGE:21628

Slc36a2 solute carrier family 36 (proton/amino acid symporter), member 2 ( MGI:1891430)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:21628 EMAGE:21628 EMAGE:21628 EMAGE:21628 EMAGE:21628
"Pseudo-wholemount" of euxassay_017922. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_017922_01 euxassay_017922_02 euxassay_017922_03 euxassay_017922_04
EMAGE:21628 EMAGE:21628 EMAGE:21628 EMAGE:21628 EMAGE:21628
euxassay_017922_05 euxassay_017922_06 euxassay_017922_07 euxassay_017922_08 euxassay_017922_09
EMAGE:21628 EMAGE:21628 EMAGE:21628 EMAGE:21628 EMAGE:21628
euxassay_017922_10 euxassay_017922_11 euxassay_017922_12 euxassay_017922_13 euxassay_017922_14
EMAGE:21628 EMAGE:21628 EMAGE:21628 EMAGE:21628 EMAGE:21628
euxassay_017922_15 euxassay_017922_16 euxassay_017922_17 euxassay_017922_18 euxassay_017922_19
EMAGE:21628
euxassay_017922_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:21628Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
21628_wholemount_strong.wlz
21628_wholemount_moderate.wlz
21628_wholemount_weak.wlz
21628_wholemount_possible.wlz
21628_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:21628_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T51015
Entity Detected:Slc36a2, solute carrier family 36 (proton/amino acid symporter), member 2 ( MGI:1891430)
Sequence:sense strand is shown

>T51015
GGTTTGGAGATGACATCAAAGCCAGCATCACTCTTAACCTGCCCAACTGCTGGCTGTACCAATCAGTCAA
GCTCCTGTATGTCGTCGGTATCCTGTGTACCTATGCCCTGCAGTTCTACGTCCCTGCGGAAATCATCATC
CCCCTTGCTGTCTCTCAGGTGTCAAAACGCTGGGCACTGCCCGTGGACCTGTCTATCCGGCTTGCCCTGG
TCTGCCTCACATGCATGCTGGCCATCCTCATCCCACGCCTGGACCTGGTCCTCTCCCTGGTGGGCTCTGT
GAGCAGCAGCGCCCTGGCCCTCATCATCCCGCCCCTGCTGGAGGTGGTCACCTACTATGGAGAGGGCATT
AGCCCCCTGACCGTCACCAAGGATGCCCTCATCAGCATCCTGGGCTTCATGGGCTTTGTGGTGGGGACCT
ACCAGGCCCTGGATGAGCTGATCAAGTCCGGGAACTCTCCCGCCCTGTCCAACTCCACCATGTTTATTCA
GTGACAGAGCCTCTCCTCGCCCACGGTGACTTATGTTGTCTATGAATTTTTTCACTTTGCCTTTTCTCTG
GTCCAAGACAGGAAAAAACAAAACAAAACAAAAAACAGGTGTAGCATATCCCCAGTACCGTGTGTGTGTG
CGCGCGCGCGCAAAGGAGATGGGGGCCATCTACACCGCATACAAGGTGTAGATAGATGGTCATTAAAAAC
AAAAGAAATGTTGGTCGTTCTCTAGTTTTCCACACTGTGGAGACCTCACCTGTGGAAACCGCCATCTTGT
TTTTGTCATTTATCTGCTAATTTCCTGCCTTGAGTGGAGCTATGCAAAAAGCAACCACTAGGCGGCAGCA
ATAGCCAGCTTTTGGCAGAAGGTAGTCTCTGCCCGCTGAGGCTTTGGTTATTTCCTTTTCCTGACCATGA
TGGGGAACACTGTGCTCAAGGCAGCATCAAGATGGAGGGGGCCAGGGCCAGTCACAATGCTCAGATAAAA
TGTCACCATCTATGTTACAGATAAGTGTGTTGAACTTTCTAAACCACTAAGTCTTAGCCCAACTCAGAAA
TCCAGCAGTG
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:GGTTTGGAGATGACATCAAAGCC; Reverse Primer - name:unspecified, sequence:CACTGCTGGATTTCTGAGTTGGG. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_017922 same experiment
 EMAGE:21629 same embryo
 EMAGE:21630 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS