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EMAGE:21667

Elk4 ELK4, member of ETS oncogene family ( MGI:102853)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:21667 EMAGE:21667 EMAGE:21667 EMAGE:21667 EMAGE:21667
"Pseudo-wholemount" of euxassay_008987. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_008987_01 euxassay_008987_02 euxassay_008987_03 euxassay_008987_04
EMAGE:21667 EMAGE:21667 EMAGE:21667 EMAGE:21667 EMAGE:21667
euxassay_008987_05 euxassay_008987_06 euxassay_008987_07 euxassay_008987_08 euxassay_008987_09
EMAGE:21667 EMAGE:21667 EMAGE:21667 EMAGE:21667 EMAGE:21667
euxassay_008987_10 euxassay_008987_11 euxassay_008987_12 euxassay_008987_13 euxassay_008987_14
EMAGE:21667 EMAGE:21667 EMAGE:21667 EMAGE:21667 EMAGE:21667
euxassay_008987_15 euxassay_008987_16 euxassay_008987_17 euxassay_008987_18 euxassay_008987_19
EMAGE:21667
euxassay_008987_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:21667Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
21667_wholemount_strong.wlz
21667_wholemount_moderate.wlz
21667_wholemount_weak.wlz
21667_wholemount_possible.wlz
21667_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:21667_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T35437
Entity Detected:Elk4, ELK4, member of ETS oncogene family ( MGI:102853)
Sequence:sense strand is shown

>T35437
TCTGCTGGACATCTAACAATGGGGAGTTCAAGCTTCTGCAGGCGGAGGAGGTGGCTCGTCTTTGGGGGAT
TCGCAAGAACAAGCCTAATATGAATTATGATAAACTCAGCCGAGCCCTGCGATACTACTACGTAAAGAAC
ATCATTAAAAAAGTGAATGGTCAGAAGTTTGTGTACAAGTTTGTCTCCTATCCAGAGATTTTGAAAATGG
ACCCACTGACGGTAGCCAGGATTGAGGGAGACTGTGAAGCTTTAAATTCCATTGAAACCAGCAGTTCCAA
AGATGTTGAGTATGGAGGAAAGGAGAGGCCACCTCAGCCTGGAGCCAAGACCTCTAGTCGCAATGACTAC
ATACACTCTGGTTTGTATTCTTCATTTACTCTTAACTCTCTGAACACCTCCAATAAGAAGCTTTTCAAGT
CAATAAAGATAGAGAATCCAGCGGAAAAACTAGCAGAGAAGAAAGCCCAGGAGCCAACACCGTCCGTCAT
CAAATTTGTGACAACGCCTGCCAAAAAGCCGCCCATCGAGCCTGTCGCTGCTGCCTGTGCAACGAGCCCT
AGTCTTTCTCCATCTTCTGAAGAAACTATCCAAGCTTTGGAGACATTAGTCTTTCCCACACTACCTTCCC
TGGAAACCCCAGCCTCCATATCCATTCTGGCTACCACCTTTAACCCCACTCCTCCGGTTCCATCCACACC
CCTTCCTCTAAAGGAGCCTCCCAGGACACCTTCTCCACCACTGAGTTCTAACCCAGACATTGACACAGAC
ATTGAGTCAGTGGCTTCTCAGCCAATGGAACTTCCAGAGAACTTATCACTGGAGCCTAAAAATGAGGATT
CAGCTTTGGCAGAAAAGGACAAA
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from wild type C57BL/6J mouse whole brain cDNA), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 73632. Forward Primer - name:073632_F_cDNA_Elk4, sequence:TCTGCTGGACATCTAACAATGG; Reverse Primer - name:073632_N_SP6_cDNA_Elk4, sequence:TTTGTCCTTTTCTGCCAAAGC. The reverse primer contains a 5' extension containing an Sp6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using Sp6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_008987 same experiment
 EMAGE:21669 same embryo
 EMAGE:21668 same embryo
 EMAGE:21666 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS