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EMAGE:29581

5730593F17Rik ( MGI:2144564)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8891
Entity Detected:5730593F17Rik, ( MGI:2144564)
Sequence:sense strand is shown

>T8891
GGCAGGTAGCCGGGTGGGCCATGTCCGGGGCCGCAGCGGGCGGCCGAGGCGGAGGTTCCTGGGGGCCGGG
GCGCGGAGGGGCGGGGGGTCTCCGGCGGGGCTGCTCTCCACCGGCGCCCGCTGGCTCCCCCCGGGTCGGT
CTGCAGCCACTCAGGGCTACGGTCCCCTTCCAGCTGCAGCAGCCTCACCAGCGCCGGGACGGGGGTGGCC
GCGCAGCCAGCGTTCCATGTTCGGTGGCCCCAGAAAAGTCGGTGTGTAGGCCTCAGCCACCCCAGGTCCG
GCGTACGTTCTCCCTGGACACCATCCTCAGTTCCTACCTTCTGGGCCAGTGGCCACGAGATGCCGATGGG
GCCTTCACCTGCTGTACCAATGACAAGGCCACCCAGACACCCCTGTCCTGGCAAGAACCAGAAGGTGAGC
GGGCCAGCTTCTGCATGCACAAGCGGTCAGCATCGTGGGGCAGCACAGACCACCGAAAAGAGATCACCAA
GTTGAAGCAGCAGCTGCAGAGGACAAAACTGAGCCGCAGTGGGAAGGAGAAGGAGCGGAGCTGCCCTGTC
CAAGGGGACCATGCTGCGCTGGGAGCAGGGAGGGCATCCCTTCCCAGCCACCCCCCAGGACCCCCCGTCC
TGCGACTCAGCCCTTGTCTGCACAGAAGCCTAGAAGGGCTCAACCAGGAGCTGGAAGAGGTGTTTGTGAA
GGAGCAGGGTGAAGAGGAGCTGCTGAGGATACTTGAGGTCCCTGATGGGCACCGTGCCCCAGCTCCTCCA
CAGAATAGCAGCTGTGACCATTCCCTCCTTTTGGAGCCAGGCAACCTGACCAGCTCTCCCTCCGTGCCAC
TGGCATCCCCCCAGCCTCCCAGCCAGGCCAGCCGTGAGGAGCACCAGGGTGCCACCGAGGAACTAGCATC
CATCCACGGTAACAAAGCCTCCTCTCCAGGCAACCCAGCCTTCCTAGAAGATGGCAGTCCGTCTCCAGTC
CTTGCCTTTGCTGCTTCCCCTCGGCCCAATCACAGCTACGTCTTCAAACGGGAGCCCCCAGAAGGCTGTG
AGAGAGTGCGTGTGTTTGAGGAGGCCACGTCCCCAGGTCCTGACTTGGCCTTCTTGACTTCCTGTCCTGA
CAAGAACAAAGTCCATTTCAACCCGACTGGCTCCGCCTTCTGCCCTGTCAGCTTGATCAAGCCCCTCTTC
CCCAGTATGGGCTTCATCTTCCGTAACTGCCCCTCCAGCCCTGGCTCCCCTCTTCCCACTGCCAGCCCCA
GGGCACCTCGGAAGGGTCCAGAAGCTTCCAAGGCCTCCTCGCTGCCATCTGAGCCATGGCAGCGCAGCCC
ACCATCGGAAGAGTCTGTGCTTTTCCAGAGCTCCTTGGTAGTCTGAGTCCCCCAGGCCCCTACCACACTT
TACCATGGAGACTAGTGCCTTGGTGGCAAGCTCTTTGTTAGCTTCCCAAGCTGGGGGATGGAGGAGCCCT
TCCTTCCCTCTTGGCCTTTGAGCACTTTCCTTTATTGTGTCAAAGCCCCAGGTCCTTTGGTGGACATCAG
CCCTCCACAGGGAGGAGACTTACCTCCTCCACCAGCAGCAGGCAGCTCACAACTTACACTTGTGTACCTG
CGGTTTCCCTCACCTGCCAGAAGGTCTTGAATCTTCTAGCCCAGGGTGTGAGTCCAGATGACTTATAAGA
GGCTCTTGTCATGGAACAGTTGGCTGTGGCTAAGAGAGGGGAGGTGCCACAGGCTTCCTGACAGCTCCAC
TCTAGAGACACAGAAAGGCAGACCAGATCCCTCCCTCCTAGAGGAGTTGACCAGAGTGGCCCTCAGGGCC
AGAACACTTGACCAATCAGCTGTTGGCAGGGGACCATGAGATTTCCCAAGTGGCATTTTCATCTCAGTTT
TACCCTGACTAAAGATTGTCTTAGGGGAATCCCAACCCAAAGTGAATAGTGGGAAGAGGGGTCTGGCATT
CCTTCAGGGGGCATGCAGCAGCCCCGTACTCGCCACCTGCCCCAGGGGGCATGAGCAGCTCCATGCCCTC
TACCCACCCCAAGGTTGGGTTGAATTAGAAAAATGCCTATTTTTCTTGTATCGATGTAGAAACTCTATTT
TCTCCCAAAGACACTATTTTTGCAGCTATTTGAAGTTTGTATATTTTCCGTATTGCAGAGCTTACACAAA
ATTGAAGAATGTTAATGTTCAAGGTTTCATATCTTGTGTTTAGAGGTTATTGTGGTTTTTGTTTGTTTAT
TTTTTGCAGATCTTGATTTTAATAGACCAAATAAATATGTATTCCAGCAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6415669 using vector (pYX-Asc) specific primers. Forward Primer - name:RZ. T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6415669 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_006156 same experiment
 EMAGE:29747 same embryo
 EMAGE:31540 same embryo
 EMAGE:29752 same embryo
 EMAGE:29578 same embryo
 EMAGE:29746 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS