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EMAGE:30028

Crnkl1 ( MGI:1914127)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:30028 EMAGE:30028 EMAGE:30028 EMAGE:30028 EMAGE:30028
euxassay_004029_01 euxassay_004029_02 euxassay_004029_03 euxassay_004029_04 euxassay_004029_05
EMAGE:30028 EMAGE:30028 EMAGE:30028 EMAGE:30028 EMAGE:30028
euxassay_004029_06 euxassay_004029_07 euxassay_004029_08 euxassay_004029_09 euxassay_004029_10
EMAGE:30028 EMAGE:30028 EMAGE:30028 EMAGE:30028 EMAGE:30028
euxassay_004029_11 euxassay_004029_12 euxassay_004029_13 euxassay_004029_14 euxassay_004029_15
EMAGE:30028 EMAGE:30028 EMAGE:30028 EMAGE:30028 EMAGE:30028
euxassay_004029_16 euxassay_004029_17 euxassay_004029_18 euxassay_004029_19 euxassay_004029_20
EMAGE:30028
euxassay_004029_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6130
Entity Detected:Crnkl1, ( MGI:1914127)
Sequence:sense strand is shown

>T6130
CGAAGTGCTTTTCTCAAGTCCGGTTGTCGGCCAGGATCGCTCGAGTTCCACGGCTGCAGTCATGGCAGCC
TCCACGGCGGCCGGGAAACAGCGCATTCCTAAAGTGGCCAAGGTGAAGAACAAGGCGCCGGCCGAAGTGC
AGATAACGGCCGAGCAGCTCCTCCGAGAAGCTAAAGAGAGAGAACTCGAGCTCCTCCCACCTCCACCTCA
GCAGAAGATCACAGATGAGGAAGAATTAAACGATTACAAACTCCGGAAAAGGAAGACTTTTGAAGATAAC
ATAAGAAAAAATAGGACTGTGATTAGCAACTGGATAAAATACGCACAATGGGAGGAAAGTCTAAAGGAAA
TTCAAAGGGCTCGATCCATATACGAGCGTGCTTTAGATGTCGACTACCGAAATATTACCCTCTGGCTGAA
ATATGCAGAAATGGAGATGAAGAACCGCCAGGTCAACCATGCCCGAAACATCTGGGACCGTGCCATCACA
ACTCTGCCACGCGTCAACCAGTTCTGGTATAAGTACACATACATGGAGGAGATGTTGGGCAACGTTGCTG
GTGCCCGCCAGGTGTTTGAGCGCTGGATGGAATGGCAGCCTGAGGAGCAGGCCTGGCATTCCTACATCAA
CTTCGAGCTGAGATACAAAGAGGTGGAGCGGGCCCGCACCATCTATGAACGCTTTGTGCTCGTGCACCCT
GCTGTGAAAAACTGGATCAAGTATGCAAGATTTGAAGAGAAGCATGCTTACTTTGCTCATGCGCGGAAAG
TCTACGAGAGAGCGGTGGAGTTTTTTGGGGATGAGCATATGGACGAACACCTCTATGTGGCCTTTGCTAA
ATTTGAGGAAAACCAGAAAGAATTTGAAAGGGTACGAGTTATCTACAAATATGCCCTGGATAGGATTTCA
AAACAAGAGGCCCAAGAACTCTTTAAAAACTATACCATCTTTGAGAAGAAGTTTGGTGACCGGAGGGGTA
TAGAAGACATCATCGTGAGCAAACGGAGGTTCCAGTATGAAGAAGAAGTGAAGGCTAATCCACACAATTA
TGATGCATGGTTTGATTATTTACGCTTGGTGGAAAGTGATGCGGAAGCTGACACTGTGCGGGAAGTCTAT
GAGAGAGCCATTGCCAATGTGCCACCCATCCAGGAGAAGAGACACTGGAAGCGCTACATCTACCTTTGGG
TTAACTATGCACTCTATGAAGAGCTGGAAGCCAAGGATCCCGAGAGAACAAGACAGGTATATCAAGCGTC
TTTGGAACTAATTCCTCACAAAAAGTTCACATTTGCCAAAATGTGGTTATATTATGCACAGTTTGAAATA
AGACAGAAAAATCTGCCATTTGCCAGAAGAGCTTTGGGAACTTCCATAGGCAAATGTCCGAAGAACAAGT
TATTCAAAGGATACATAGAACTGGAACTGCAGCTTCGAGAATTTGACAGATGCAGGAAGCTTTATGAAAA
GTTTTTGGAATTTGGACCTGAAAATTGTACCTCATGGATTAAGTTTGCAGAATTAGAGACAATCCTTGGT
GATATTGAGAGAGCTCGGGCAATCTATGAATTAGCCATCAGCCAGCCACGCTTGGATATGCCAGAGGTAC
TTTGGAAATCATATATTGATTTTGAGATTGAGCAGGAAGAAACTGAAAGAACACGAAACCTTTACCGACA
ATTGCTTCAGCGAACACAGCATGTCAAGGTATGGATCAGTTTTGCTCAGTTTGAGTTATCGTCTGGGAAA
GAAGGAAGTGTGGCTAAATGCAGACAGATTTATGAAGAAGCTAACAAAACCATGAGAAACTGTGAAGAAA
AAGAAGAGAGGCTTATGTTGCTGGAATCCTGGAGAAGTTTTGAAGATGAATTTGGCACAGTATCAGACAA
GGAGAGAGTAGACAAACTCATGCCAGAAAAGGTCAAGAAGAGAAGAAAGGTCCAGGCCGACGATGGGTCT
GACGCCGGGTGGGAAGAATACTATGACTACATCTTCCCAGAGGATGCTGCCAACCAGCCTAACCTCAAGC
TCCTGGCCATGGCCAAGCTGTGGAAGAAACAGCAACAGGAAAGAGAAGCTGCCGAACAGGATCCAGATAA
GGACATTGATGAGAGTGAATCCTCATCTTTTTAAATGTTATAATTGCTTTTTATAAATGAACAGTTTAGA
ACTTTGACTCCTAAATGTTTTTATGTATTTACTCAGTAAGGAGTTGTTTGGCATCTTTGAATTATTTTTT
AAAATGCTCTTGGGTTTAACTATGGGTGAGAAACTGCAAGTAAAAGAATTTTTTTCTAAAAAAAAAAAAA
AAAA
Notes:The probe template was PCR amplified from IMAGE:3495255 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3495255 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004029 same experiment
 EMAGE:30945 same embryo
 EMAGE:30025 same embryo
 EMAGE:30012 same embryo
 EMAGE:29973 same embryo
 EMAGE:30896 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS