EMAGE mouse gene expression spatial database

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EMAGE:30268

Ssbp2 single-stranded DNA binding protein 2 ( MGI:1914220)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


euxassay_000498_01	euxassay_000498_02	euxassay_000498_03	euxassay_000498_04	euxassay_000498_05

euxassay_000498_06	euxassay_000498_07	euxassay_000498_08	euxassay_000498_09	euxassay_000498_10

euxassay_000498_11	euxassay_000498_12	euxassay_000498_13	euxassay_000498_14	euxassay_000498_15

euxassay_000498_16	euxassay_000498_17	euxassay_000498_18	euxassay_000498_19	euxassay_000498_20

euxassay_000498_21	euxassay_000498_22	euxassay_000498_23	euxassay_000498_24

View assay images:
Expression pattern clarity:

Expression Pattern Description

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T2373
Entity Detected:	Ssbp2, single-stranded DNA binding protein 2 ( MGI:1914220)
Sequence:	sense strand is shown >T2373 GNCCTCGAGGCCAGATTCGGATCCTTGGGCAAAGGCAAGAGTAACAGCAGCGCCGTCCCGTCCGACAGCC AGGCCCGGGAGAAGTTAGCACTCTACGTGTATGAATATCTGCTCCATGTAGGAGCTCAGAAATCGGCTCA GACATTTTTATCAGAGATAAGATGGGAAAAAAACATCACATTGGGGGAGCCGCCCGGATTCTTACATTCT TGGTGGTGTGTATTTTGGGATCTCTACTGTGCAGCTCCAGAGAGACGGGAAACCTGTGAACACTCGAGCG AAGCTAAAGCCTTCCATGATTATAGTGCTGCAGCAGCTCCCAGCCCCGTGCTAGGAAACATGCCCCCAGG AGATGGCATGCCAGTAGGTCCCGTGCCACCAGGGTTCTTTCAGCCTTTTATGTCGCCTCGGTACCCTGGC GGCCCGAGGCCCCCATTGAGGATACCTAACCAGGCACTTGGAGGTGTCCCAGGAAGTCAGCCATTACTCC CCAGTGGAATGGATCCAACACGACAACAAGGACATCCAAATATGGGTGGACCAATGCAGAGAATGACTCC CCCAAGAG
Notes:	The probe template was PCR amplified from IMAGE:1181414 using vector specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template usi. T3 polymerase. EMAGE Editor's Note: the partial probe sequence indicated here was given by the EURExpress Consortium and has been checked using BLAST comparison against all available partial insert sequences of IMAGE:1181414 from NCBI. In cases where no BLAST hit was found (because the two sequence reads are found at opposing ends of the insert sequence), both end sequences were then checked against the appropriate cDNA RefSeq to ensure validity of the information.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EurExpress:euxassay_000498 same experiment
	EMAGE:30283 same embryo
	EMAGE:31311 same embryo
	EMAGE:30277 same embryo
	EMAGE:30297 same embryo
	EMAGE:30253 same embryo
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source