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EMAGE:30888

Ugt1a1 UDP glucuronosyltransferase 1 family, polypeptide A1 ( MGI:98898)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:30888 EMAGE:30888 EMAGE:30888 EMAGE:30888 EMAGE:30888
euxassay_004058_01 euxassay_004058_02 euxassay_004058_03 euxassay_004058_04 euxassay_004058_05
EMAGE:30888 EMAGE:30888 EMAGE:30888 EMAGE:30888 EMAGE:30888
euxassay_004058_06 euxassay_004058_07 euxassay_004058_08 euxassay_004058_09 euxassay_004058_10
EMAGE:30888 EMAGE:30888 EMAGE:30888 EMAGE:30888 EMAGE:30888
euxassay_004058_11 euxassay_004058_12 euxassay_004058_13 euxassay_004058_14 euxassay_004058_15
EMAGE:30888 EMAGE:30888 EMAGE:30888 EMAGE:30888 EMAGE:30888
euxassay_004058_16 euxassay_004058_17 euxassay_004058_18 euxassay_004058_19 euxassay_004058_20
EMAGE:30888
euxassay_004058_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
lateral ventricle choroid plexus
moderate moderate
regionalmoderate expression: see section 04 05 13 14 15 weak expression: see section 06 07 09 10 11 12 16
4th ventricle lateral recess
moderate moderate
regionalmoderate expression: see section 03 04 05 13 weak expression: see section 06 07 08 09 10 11 12 16 17
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4960
Entity Detected:Ugt1a1, UDP glucuronosyltransferase 1 family, polypeptide A1 ( MGI:98898)
Sequence:sense strand is shown

>T4960
ATACCATGACTGTGGTGTGCTGGAGCTCGCGTTTGCTTCTGCTTCTTCCGTACCTTCTGTTGTGTGTGTT
CGGTCCCTCTGCATCCCATGCTGGGAGGCTGTTAGTGTTCCCTATGGATGGAAGCCACTGGCTGAGTATG
CTTGGAGTTATTCAGCAGCTCCAGCAGAAGGGGCACGAAGTTGTGGTCATAGCACCTGAAGCCTCAATAC
ACATAAAAGAAGGATCATTTTACACTCTGAGGAAGTTCCCTGTGCCATTCCAGAAGGAAAATGTGACAGC
TACTTTGGTGGAACTTGGACGGACTGCCTTTAATCAAGATTCTTTTCTGCTGCGCGTGGTCAAAATATAT
ATGAAAGTCAAAAGGGATTCCAGTATGCTCCTAGCTGGCTGCTCCCACCTGCTGCACAATGCCGAGTTTA
TGGCCTCTCTGGAAGAAAGTCACTTTGATGCTCTGCTGACAGACCCTTTCCTTCCCTGTGGCTCCATTGT
GGCCCAGTACCTGACTGTGCCCACTGTGTACTTCTTGAATAAATTGCCATGCAGCCTGGATTCAGAAGCT
ACCCAATGCCCCGTCCCATTGTCCTACGTGCCCAAGAGTTTGTCTTTCAACTCAGACCGCATGAACTTCC
TACAGCGAGTGAAGAACGTGCTCCTGGCCGTGTCAGAGAACTTTATGTGCAGAGTGGTTTATTCCCCCTA
TGGGTCACTTGCCACTGAAATCTTACAGAAAGAGGTGACTGTCCAGGATCTTCTGAGCCCTGCATCTATC
TGGCTGATGAGAAGTGACTTTGTGAAAGATTACCCCAGGCCCATCATGCCCAACATGGTTTTTATTGGTG
GTATAAATTGCCTTCAGAAAAAGCCCCTATCCCAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCA
TGGCATCGTGGTTTTCTCTTTGGGATCCATGGTCTCAGAGATTCCGGAGAAGAAAGCCATGGAAATTGCT
GAGGCTTTGGGCAGAATTCCTCAGACGGTCCTGTGGCGCTACACCGGAACTAGACCATCGAATCTTGCAA
AGAACACAATTCTTGTCAAATGGCTACCCCAAAATGATCTGCTTGGTCATCCAAAGACTCGGGCATTCAT
CACACACTCTGGCTCCCATGGTATTTATGAAGGAATATGCAATGGAGTTCCGATGGTGATGATGCCCCTA
TTTGGCGATCAGATGGACAATGCCAAGCGCATGGAAACTCGGGGAGCTGGGGTGACCCTGAATGTCCTTG
AAATGACTGCTGATGATTTGGAAAATGCCCTTAAAACTGTCATCAACAACAAGAGCTACAAGGAGAACAT
CATGCGCCTCTCCAGCCTTCACAAGGACCGTCCTATAGAGCCTCTGGACCTGGCTGTGTTCTGGGTGGAA
TACGTGATGAGGCACAAGGGGGCACCACACCTGCGCCCGGCCGCCCATGACCTCACCTGGTATCAGTACC
ACTCCTTGGATGTGATTGGCTTCCTCCTGGCCATTGTGTTGACAGTGGTCTTCATTGTCTTTAAATGTTG
TGCCTATGGCTGCCGGAAATGCTTTGGGGGAAAGGGGCGAGTGAAGAAATCACACAAATCCAAGACCCAT
TGAGAAGTGGGGGGAAGTGAAGGAGAAGTATTAGTTCATTATCTGATCAGTTGAAACTTGGAAACAAGTG
TTAGATCCATATTGTTTTTGTTAGGGAAATAATTCACCATACATTATACATTCAGCACATTTAAAAATAA
TAATAATAACAATCTAATTGCTGGCCACACCCATCAGGGAAGGTTCTAGTATATGTGATGTGCTTTTCCA
GTATCTTCAGTCTAGACAACTCTTGCCATCTGTTGGTAATTTACAGAAAGTCTGGCACTCTGCTTTCAGT
GACAGCCCCACAGTTTCCCCTGCTCCCGCCAGCTGATGGCTTTCTCCCCTGGATTCTCAGACTGCCGTGG
CCTTCTCCAGTGTTAGTCATTCTTCATTGTGTTCATGCATTATGGGTAGCAAGACCTTTGGAGCTTTGGG
AGAAGAGATGAGGCTGTGACACTGATGGCCCTGTGTTTGAGATAATAATTGTTGCTTGTGCCGGAATTTG
ATGAAAACCAAAGTATGTTCTAAGGCAAGTACATCTTCTATTGTGTTCCCAAACCAAGAACTTATCAATA
AATTCATATAAATTGTAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5135493 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5135493 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004058 same experiment
 EMAGE:30014 same embryo
 EMAGE:30023 same embryo
 EMAGE:30022 same embryo
 EMAGE:30942 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS