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EMAGE:31321

Slc5a3 ( MGI:1858226)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31321 EMAGE:31321 EMAGE:31321 EMAGE:31321 EMAGE:31321
euxassay_019742_01 euxassay_019742_02 euxassay_019742_03 euxassay_019742_04 euxassay_019742_05
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euxassay_019742_06 euxassay_019742_07 euxassay_019742_08 euxassay_019742_09 euxassay_019742_10
EMAGE:31321 EMAGE:31321 EMAGE:31321 EMAGE:31321 EMAGE:31321
euxassay_019742_11 euxassay_019742_12 euxassay_019742_13 euxassay_019742_14 euxassay_019742_15
EMAGE:31321 EMAGE:31321 EMAGE:31321 EMAGE:31321 EMAGE:31321
euxassay_019742_16 euxassay_019742_17 euxassay_019742_18 euxassay_019742_19 euxassay_019742_20
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euxassay_019742_21 euxassay_019742_22 euxassay_019742_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
pelvic girdle musculature
moderate moderate
regionalmoderate expression: see section 01 02 03 04 18 19 20 21 22 23 weak expression: see section 05 17
extrinsic ocular muscle
moderate moderate
regionalmoderate expression: see section 04 05 06 20 21 22 weak expression: see section 03
rectum
moderate moderate
regionalmoderate expression: see section 11
nose
weak weak
regionalweak expression: see section 09 10 11 18 19
axial musculature
moderate moderate
regionalmoderate expression: see section 01 02 03 weak expression: see section 04 18 19 20
metencephalon part of 4th ventricle choroid plexus
strong strong
regionalstrong expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 16 17 18 19 moderate expression: see section 15
axial skeleton cervical region
moderate moderate
regionalmoderate expression: see section 06 07 08 09 11 14 15 weak expression: see section 12 13
telencephalon ventricular layer
strong strong
regionalstrong expression: see section 12
midbrain ventricular layer
strong strong
regionalstrong expression: see section 07 08 10 11 moderate expression: see section 09 12 13 weak expression: see section 06
hypothalamus ventricular layer
moderate moderate
regionalmoderate expression: see section 13 14
lateral ventricle choroid plexus
strong strong
regionalstrong expression: see section 06 07 08 09 10 11 16 17 18 moderate expression: see section 15
nasal septum
weak weak
regionalweak expression: see section 12 13 14 16 17
diencephalon lateral wall ventricular layer
strong strong
regionalstrong expression: see section 12
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T56065
Entity Detected:Slc5a3, ( MGI:1858226)
Sequence:sense strand is shown

>T56065
CCATATTCACCCTCGATGTGTACAAACTTATCCGCAAGAGTGCAAGCTCCCGGGAACTAATGATTGTGGG
CAGGATATTTGTGGCTTTTATGGTTGTCATCAGCATAGCATGGGTGCCAATTATTGTGGAGATGCAAGGA
GGCCAAATGTACCTTTACATCCAGGAGGTGGCAGATTATCTGACTCCTCCCGTGGCAGCCCTCTTCCTTC
TGGCAATTTTCTGGAAACGCTGCAATGAGCAAGGGGCTTTTTATGGTGGAATGGCAGGCTTTGTTCTTGG
AGCTGTCCGTTTGATACTGGCTTTTACCTACCGTGCTCCTGAGTGTGATCAACCTGATAACAGGCCAGGC
TTCATCAAAGACATCCATTATATGTACGTGGCTACGGCATTATTTTGGATCACAGGACTCATTACTGTGA
TTGTTAGTCTTCTCACACCACCTCCCACAAAGGATCAGATTCGTACCACTACCTTTTGGTCAAAGAAGAC
CCTGGTGACAAAGGAGAGCTGTTCTCAGAAAGACGAACCATACAAAATGCAAGAGAAGAGCATCCTGCAG
TGCAGCGAGAATAGCGAAGTCATCAGCCATACTATTCCCAACGGGAAGTCTGAAGACAGCATTAAGGGAC
TGCAACCTGAAGACGTTAATCTGCTGGTGACATGCCGAGAAGAGGGCAACCCAGTGGCTTCCATGGGTCA
TTCAGAGGCAGAAACACCAGTAGATGCTTATTCCAATGGGCAAGCAGCTCTCATGGGTGAGAGAGAAAGA
GAGAAGGAAACGGAAAATAGAAGCCAGTATTGGAAGTTCATAGACTGGTTTTGTGGCTTTAAGAGTAAAA
GCCTTAGCAAGAGGAGCCTCAGAGACTTGATGGATGAGGAGGCTGTGTGTTTACAAATGTTAGAAGAGAC
TCCACAAGTTAAAGTGATCCTAAACATTGGACTTTTTGCTGTGTGTTCACTTGGAATTTTCATGTTTGTT
TATTTCTCCTTATGA
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. .
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_019742 same experiment
 EMAGE:30431 same embryo
 EMAGE:29259 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS